RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ABRAXAS1Q6UWZ7 409 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 STRADAQ7RTN6 431 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 SLFN11Q7Z7L1 901 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM48Q8IWZ4 208 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 RBM12BQ8IXT5 1001 aaKnown RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 SYTL1Q8IYJ3 562 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CHDHQ8NE62 594 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 ADAMTS18Q8TE60 1221 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 PIH1D2Q8WWB5 315 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 RXFP2Q8WXD0 754 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 SNX21Q969T3 373 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CELF6Q96J87 481 aaKnown RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TAAR6Q96RI8 345 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM56Q9BRZ2 755 aaKnown RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TMEM121Q9BTD3 319 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 DHRS4Q9BTZ2 278 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 RIOK2Q9BVS4 552 aaKnown RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CINPQ9BW66 212 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CARD9Q9H257 536 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CATSPERBQ9H7T0 1116 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 ATP13A2Q9NQ11 1180 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 POT1Q9NUX5 634 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 TNFRSF10DQ9UBN6 386 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC23A2Q9UGH3 650 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 CFAP45Q9UL16 551 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 STAB1Q9NY15 2570 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 MYO7BQ6PIF6 2116 aa7.16□□□□□ -1.26
SPTLC1-205ENST00000477888 FBN1P35555 2871 aaKnown RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CSPG4Q6UVK1 2322 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM170AA1A519 330 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 C2CD4BA6NLJ0 364 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 OR52A4PA6NMU1 304 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 FOXN3O00409 490 aaPredicted RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PEX12O00623 359 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PGLSO95336 258 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 LCA5LO95447 670 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CLDN14O95500 239 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CPP00450 1065 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 NEFLP07196 543 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF8P17098 575 aaPredicted RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CTPS1P17812 591 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC9A1P19634 815 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 SDC4P31431 198 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 DNAJA1P31689 397 aaKnown RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PTPN9P43378 593 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 ARL4DP49703 201 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PPP2R2AP63151 447 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 SLC10A7Q0GE19 358 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 TRAF2Q12933 501 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 FOXD4Q12950 439 aaPredicted RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PLCL1Q15111 1095 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 SKOR2Q2VWA4 1001 aaPredicted RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PTCHD3Q3KNS1 767 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PLA2G4EQ3MJ16 856 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 GFRALQ6UXV0 394 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 WASH2PQ6VEQ5 465 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 TRIM72Q6ZMU5 477 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 ARHGAP36Q6ZRI8 547 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CATSPER1Q8NEC5 780 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM172AQ8WUF8 416 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 NR4A3Q92570 626 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CLIP3Q96DZ5 547 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 GBP5Q96PP8 586 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 SMIM14Q96QK8 99 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 WDR24Q96S15 920 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CD180Q99467 661 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 DPH2Q9BQC3 489 aaPredicted RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 CRACR2AQ9BSW2 395 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 NOD2Q9HC29 1040 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 METTL5Q9NRN9 209 aaKnown RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 FAM207AQ9NSI2 230 aaPredicted RBP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 ATXN10Q9UBB4 475 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 APEX2Q9UBZ4 518 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 PADI2Q9Y2J8 665 aa7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.15□□□□□ -1.26
SPTLC1-205ENST00000477888 TLCD2A6NGC4 264 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 ARHGAP42A6NI28 874 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 FADS2P1A8MWK0 482 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 COL6A5A8TX70 2615 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 CHUKO15111 745 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 FANCGO15287 622 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 FGF10O15520 208 aaPredicted RBP7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 LDB2O43679 373 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 FZD6O60353 706 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 ZNF202O95125 648 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 UNC5CO95185 931 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 ZBTB11O95625 1053 aaPredicted RBP7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 PDHA1P08559 390 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 PNMA6AP0CW24 399 aaPredicted RBP7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 CYP11B1P15538 503 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 RPL10P27635 214 aaKnown RBP7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 RENBPP51606 427 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 SMSP52788 366 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 STC1P52823 247 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 IL10RBQ08334 325 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 AIMP2Q13155 320 aaKnown RBP7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 PNOCQ13519 176 aa7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 PRKD1Q15139 912 aaPredicted RBP7.14□□□□□ -1.27
SPTLC1-205ENST00000477888 TMTC4Q5T4D3 741 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms