RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	GOLGA6A	Q9NYA3	693 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CWC15	Q9P013	229 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PTGFRN	Q9P2B2	879 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	EIF2B4	Q9UI10	523 aa	Known RBP	4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MMP17	Q9ULZ9	603 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SCML1	Q9UN30	329 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ERVW-1	Q9UQF0	538 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CHST2	Q9Y4C5	530 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HYOU1	Q9Y4L1	999 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HEY1	Q9Y5J3	304 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SNX10	Q9Y5X0	201 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	STON1	Q9Y6Q2	735 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OBSL1	O75147	1896 aa		4.55	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MYO10	Q9HD67	2058 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TCRBV21S2A2	A0A5A6	115 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CFAP69	A5D8W1	941 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TMEM200C	A6NKL6	621 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HACD1	B0YJ81	288 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PRRT4	C9JH25	899 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM72C	H0Y354	149 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289		K7EQS6	105 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	APOC4-APOC2	K7ER74	178 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ALOX15B	O15296	676 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	B3GALT2	O43825	422 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CEP104	O60308	925 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CST8	O60676	142 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	POP4	O95707	220 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GAS8	O95995	478 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	IL1B	P01584	269 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	APOC2	P02655	101 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TCP1	P17987	556 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCNC	P24863	283 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	IL1R2	P27930	398 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OXTR	P30559	389 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DPP6	P42658	865 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	WAS	P42768	502 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PAPOLA	P51003	745 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SGSH	P51688	502 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TAS2R40	P59535	323 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	POLR2L	P62875	67 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PHC1	P78364	1004 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CSTF1	Q05048	431 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZBTB16	Q05516	673 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF33A	Q06730	810 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	BCL2L1	Q07817	233 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	IL10RB	Q08334	325 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	AP1B1	Q10567	949 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DPYSL3	Q14195	570 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ELAVL3	Q14576	367 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PAFAH1B3	Q15102	231 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DLG2	Q15700	870 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CA9	Q16790	459 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HNRNPA1L2	Q32P51	320 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FUT11	Q495W5	492 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	RAB6C	Q53S08	254 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CARD16	Q5EG05	197 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FSCB	Q5H9T9	825 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DNTTIP2	Q5QJE6	756 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM72A	Q5TYM5	149 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HECTD2	Q5U5R9	776 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	MANEAL	Q5VSG8	457 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DAB2IP	Q5VWQ8	1189 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ZNF776	Q68DI1	518 aa	Predicted RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ITPRIPL1	Q6GPH6	555 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM72D	Q6L9T8	149 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CXorf57	Q6NSI4	855 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	DARS2	Q6PI48	645 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SLC36A4	Q6YBV0	504 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GSTA5	Q7RTV2	222 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NT5DC3	Q86UY8	548 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	KBTBD6	Q86V97	674 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FAM72B	Q86X60	149 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SYT12	Q8IV01	421 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SLC41A1	Q8IVJ1	513 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCDC13	Q8IYE1	715 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CCDC105	Q8IYK2	499 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	APCDD1	Q8J025	514 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ARFGAP1	Q8N6T3	406 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OR7D4	Q8NG98	312 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OR2T3	Q8NH03	318 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OLIG1	Q8TAK6	271 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NTN5	Q8WTR8	489 aa	Predicted RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	TFB1M	Q8WVM0	346 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HMGB4	Q8WW32	186 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	ISG20	Q96AZ6	181 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CLDN23	Q96B33	292 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SIPA1	Q96FS4	1042 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	CELF6	Q96J87	481 aa	Known RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	LRIG1	Q96JA1	1093 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	GDAP1L1	Q96MZ0	367 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	PEBP4	Q96S96	227 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	VAT1	Q99536	393 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	NAPG	Q99747	312 aa	Predicted RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OMD	Q99983	421 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	HEPH	Q9BQS7	1158 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	OSBPL8	Q9BZF1	889 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	SLC39A8	Q9C0K1	460 aa		4.54	□□□□□ -1.68
NSMCE4A-208	ENST00000477289	POLR1E	Q9GZS1	481 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms