RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TSPAN11A1L157 253 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 MACROD2A1Z1Q3 448 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 ZNF185O15231 689 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 NADKO95544 446 aaPredicted RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 GM2AP17900 193 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 SERPINA4P29622 427 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 HSPA9P38646 679 aaKnown RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 DYNLT1P63172 113 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 GBE1Q04446 702 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 GALNT2Q10471 571 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 RALGDSQ12967 914 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 NFATC2Q13469 925 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 PEX6Q13608 980 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 TIGD7Q6NT04 549 aaPredicted RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 ZSWIM9Q86XI8 627 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 PQLC3Q8N755 202 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 TSEN2Q8NCE0 465 aaKnown RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 ST6GALNAC3Q8NDV1 305 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 UBE2Q2Q8WVN8 375 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 RBM41Q96IZ5 413 aaKnown RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 BARD1Q99728 777 aaKnown RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 TSGA10Q9BZW7 698 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 LACRTQ9GZZ8 138 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 SUV39H2Q9H5I1 410 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 G3BP2Q9UN86 482 aaKnown RBP13.87□□□□□ -0.19
ATG9A-220ENST00000475339 B3GNT3Q9Y2A9 372 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 HEY1Q9Y5J3 304 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 DUSP10Q9Y6W6 482 aa13.87□□□□□ -0.19
ATG9A-220ENST00000475339 F5H423 210 aaPredicted RBP13.86□□□□□ -0.19
ATG9A-220ENST00000475339 PJA2O43164 708 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 MAFKO60675 156 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SPAG6O75602 509 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 ZRANB2O95218 330 aaKnown RBP eCLIP13.86□□□□□ -0.19
ATG9A-220ENST00000475339 EML2O95834 649 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 PTPN4P29074 926 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 MMP13P45452 471 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SCNN1BP51168 640 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 KRTAP10-9P60411 292 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 AP1S1P61966 158 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SLC10A7Q0GE19 358 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 RAPSNQ13702 412 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 TFDP2Q14188 446 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 IL11RAQ14626 422 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 CRB2Q5IJ48 1285 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 MARC1Q5VT66 337 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 KAZNQ674X7 775 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 FAM199XQ6PEV8 388 aaPredicted RBP13.86□□□□□ -0.19
ATG9A-220ENST00000475339 LIPIQ6XZB0 460 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SRLQ86TD4 932 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SYVN1Q86TM6 617 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 ZGRF1Q86YA3 2104 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 KATNAL2Q8IYT4 538 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SYCE1Q8N0S2 351 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 SFRP1Q8N474 314 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 CCNYQ8ND76 341 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 HCAR2Q8TDS4 363 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 PSKH2Q96QS6 385 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 TUBGCP5Q96RT8 1024 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 GPR87Q9BY21 358 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 FRMD8Q9BZ67 464 aaPredicted RBP13.86□□□□□ -0.19
ATG9A-220ENST00000475339 TRIM8Q9BZR9 551 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 BRD8Q9H0E9 1235 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 PHPT1Q9NRX4 125 aaPredicted RBP13.86□□□□□ -0.19
ATG9A-220ENST00000475339 GPR83Q9NYM4 423 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 TTLL3Q9Y4R7 772 aa13.86□□□□□ -0.19
ATG9A-220ENST00000475339 MYO7BQ6PIF6 2116 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 CFAP69A5D8W1 941 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 C3orf70A6NLC5 250 aaPredicted RBP13.85□□□□□ -0.19
ATG9A-220ENST00000475339 A8MX80 341 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 PPP1R12AO14974 1030 aaPredicted RBP13.85□□□□□ -0.19
ATG9A-220ENST00000475339 PRICKLE3O43900 615 aaPredicted RBP13.85□□□□□ -0.19
ATG9A-220ENST00000475339 ANKRD34CP0C6C1 535 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 ELFN1P0C7U0 828 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 CSNK1DP48730 415 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 SEPHS1P49903 392 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 GFERP55789 205 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 HHEXQ03014 270 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 BCL2L1Q07817 233 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 ITKQ08881 620 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 NSUN2Q08J23 767 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG9A-220ENST00000475339 ART3Q13508 389 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 LAMB3Q13751 1172 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 SLC9A4Q6AI14 798 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 MFSD7Q6UXD7 560 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 SPOCD1Q6ZMY3 1216 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 ZNF295-AS1Q8N0V1 137 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 ZNF641Q96N77 438 aaPredicted RBP13.85□□□□□ -0.19
ATG9A-220ENST00000475339 SMAD5Q99717 465 aaKnown RBP13.85□□□□□ -0.19
ATG9A-220ENST00000475339 TEX101Q9BY14 249 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 DTLQ9NZJ0 730 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 TRIM10Q9UDY6 481 aa13.85□□□□□ -0.19
ATG9A-220ENST00000475339 CCDC66A2RUB6 948 aa13.84□□□□□ -0.19
ATG9A-220ENST00000475339 GRID2IPA4D2P6 1211 aa13.84□□□□□ -0.19
ATG9A-220ENST00000475339 MATN3O15232 486 aa13.84□□□□□ -0.19
ATG9A-220ENST00000475339 TIAF1O95411 115 aa13.84□□□□□ -0.19
ATG9A-220ENST00000475339 MT-ND3P03897 115 aa13.84□□□□□ -0.19
ATG9A-220ENST00000475339 COX6B1P14854 86 aa13.84□□□□□ -0.19
ATG9A-220ENST00000475339 CTNNA1P35221 906 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms