RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SMAD1Q15797 465 aaKnown RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 DUPD1Q68J44 220 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 KIAA0930Q6ICG6 404 aaPredicted RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 SDCCAG8Q86SQ7 713 aaPredicted RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 TMEM135Q86UB9 458 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 AMZ2Q86W34 360 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 ZNF547Q8IVP9 402 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 SLC35F3Q8IY50 421 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 MMGT1Q8N4V1 131 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 BEND7Q8N7W2 519 aaPredicted RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 NAT14Q8WUY8 206 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 SGSM3Q96HU1 749 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 EBNA1BP2Q99848 306 aaKnown RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 TRIM56Q9BRZ2 755 aaKnown RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 TIMM29Q9BSF4 260 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 NAT9Q9BTE0 207 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 SLC23A2Q9UGH3 650 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 ST14Q9Y5Y6 855 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 DNMT3AQ9Y6K1 912 aaPredicted RBP12.23□□□□□ -0.45
DDX56-209ENST00000473924 DNAH14Q0VDD8 3507 aa12.23□□□□□ -0.45
DDX56-209ENST00000473924 IGLV3-16A0A075B6K0 115 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 GOLGA8KD6RF30 607 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 F8W8V4 182 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 GOLGA8TH3BQL2 631 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 QSOX1O00391 747 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 PFDN6O15212 129 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 KCNJ13O60928 360 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 NDUFS3O75489 264 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 BANF1O75531 89 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 USP1O94782 785 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 TTC4O95801 387 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 SLC2A4P14672 509 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 IDSP22304 550 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 ACP1P24666 158 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 CAV1Q03135 178 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 PDIA2Q13087 525 aaKnown RBP12.22□□□□□ -0.45
DDX56-209ENST00000473924 LONRF1Q17RB8 773 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 BCL7AQ4VC05 210 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 HP1BP3Q5SSJ5 553 aaPredicted RBP12.22□□□□□ -0.45
DDX56-209ENST00000473924 MRNIPQ6NTE8 343 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 OGFOD3Q6PK18 319 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 CENPUQ71F23 418 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 LDB1Q86U70 411 aaPredicted RBP12.22□□□□□ -0.45
DDX56-209ENST00000473924 CCNJLQ8IV13 435 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 AGGF1Q8N302 714 aaeCLIP12.22□□□□□ -0.45
DDX56-209ENST00000473924 CLDN19Q8N6F1 224 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 KYQ8NBH2 561 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
DDX56-209ENST00000473924 NAT6Q93015 286 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 LRRC39Q96DD0 335 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 CCDC97Q96F63 343 aaPredicted RBP12.22□□□□□ -0.45
DDX56-209ENST00000473924 PWWP2AQ96N64 755 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 CARD6Q9BX69 1037 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 VPS37BQ9H9H4 285 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 C20orf96Q9NUD7 363 aaPredicted RBP12.22□□□□□ -0.45
DDX56-209ENST00000473924 FAM8A1Q9UBU6 413 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 CHMP2BQ9UQN3 213 aa12.22□□□□□ -0.45
DDX56-209ENST00000473924 SPTBN4Q9H254 2564 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 TRBV23OR9-2A0A075B6M9 112 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 KLHL33A6NCF5 533 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 PDZK1P1A8MUH7 402 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 ESPNB1AK53 854 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 ZNF500O60304 480 aaPredicted RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 NOBOXO60393 691 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 RFPL3O75679 317 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 AP2A2O94973 939 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 OR56A5P0C7T3 313 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 ELK3P41970 407 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 PRLHRP49683 370 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 ACADVLP49748 655 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 CLCNKAP51800 687 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 PLTPP55058 493 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 GUCY2DQ02846 1103 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 ILKQ13418 452 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 SEMA3AQ14563 771 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 SEPT7Q16181 437 aaKnown RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 GLE1Q53GS7 698 aaKnown RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 SPANXN3Q5MJ09 141 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 NEPROQ6NW34 567 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 GUSBP11Q6P575 273 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 PACS1Q6VY07 963 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 EFL1Q7Z2Z2 1120 aaKnown RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 C11orf96Q7Z7L8 435 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 SLCO6A1Q86UG4 719 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 NAGSQ8N159 534 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 NOA1Q8NC60 698 aaKnown RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 OR6C4Q8NGE1 309 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 GABPB2Q8TAK5 448 aaPredicted RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 IFI44Q8TCB0 444 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 PATE1Q8WXA2 126 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 CFAP36Q96G28 342 aa12.21□□□□□ -0.45
DDX56-209ENST00000473924 FCRL3Q96P31 734 aaPredicted RBP12.21□□□□□ -0.45
DDX56-209ENST00000473924 PRDM8Q9NQV8 689 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms