RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 TMPRSS9Q7Z410 1059 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 LINC00523Q86TU6 105 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 AMZ2Q86W34 360 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 TAB3Q8N5C8 712 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-226ENST00000473066 TRIM58Q8NG06 486 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 MAIP1Q8WWC4 291 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 CXorf40BQ96DE9 158 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 DCUN1D1Q96GG9 259 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 FCRL3Q96P31 734 aaPredicted RBP15.35■□□□□ 0.05
MRPL55-226ENST00000473066 ARNT2Q9HBZ2 717 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 POT1Q9NUX5 634 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 RALYQ9UKM9 306 aaKnown RBP15.35■□□□□ 0.05
MRPL55-226ENST00000473066 SLC30A1Q9Y6M5 507 aa15.35■□□□□ 0.05
MRPL55-226ENST00000473066 OR2AG2A6NM03 316 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 ERI2A8K979 691 aaKnown RBP15.34■□□□□ 0.05
MRPL55-226ENST00000473066 E7EVH7 732 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 LIASO43766 372 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 METTL18O95568 372 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 AP2A1O95782 977 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 ITIH1P19827 911 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 SLC5A2P31639 672 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 FDFT1P37268 417 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 TMPRSS15P98073 1019 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 SQSTM1Q13501 440 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 PTPRCAPQ14761 206 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 TMEM71Q6P5X7 295 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 TMEM220Q6QAJ8 160 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 ZNF662Q6ZS27 426 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 ZNF547Q8IVP9 402 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 KLHDC8BQ8IXV7 354 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 CCDC89Q8N998 374 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 RASGEF1AQ8N9B8 481 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 AGBL5Q8NDL9 886 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 RCBTB1Q8NDN9 531 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 OR13C4Q8NGS5 318 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 NCSTNQ92542 709 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 C19orf43Q9BQ61 176 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 SLC23A2Q9UGH3 650 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 WDFY3Q8IZQ1 3526 aa15.34■□□□□ 0.05
MRPL55-226ENST00000473066 AHCTF1Q8WYP5 2266 aa15.33■□□□□ 0.05
MRPL55-226ENST00000473066 GAPDHSO14556 408 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 THRAP10827 490 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 RPL10P27635 214 aaKnown RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 ZNF140P52738 457 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 DRG2P55039 364 aaKnown RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 UBE2IP63279 158 aaKnown RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 CXADRP78310 365 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 CCZ1BP86790 482 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 CCZ1P86791 482 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 SNX1Q13596 522 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 POU6F1Q14863 301 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 SNAP47Q5SQN1 464 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 FNBP1LQ5T0N5 605 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 AGAP9Q5VTM2 703 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 KCTD11Q693B1 232 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 DENND5AQ6IQ26 1287 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 WASH2PQ6VEQ5 465 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 PPP1R21Q6ZMI0 780 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 TMEM26Q6ZUK4 368 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 DET1Q7L5Y6 550 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 RBM12BQ8IXT5 1001 aaKnown RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 DNAAF3Q8N9W5 541 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 HEXDCQ8WVB3 486 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 C1orf54Q8WWF1 131 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 RTP4Q96DX8 246 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 CRELD1Q96HD1 420 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 UCK1Q9HA47 277 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 WASH6PQ9NQA3 447 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 KCTD3Q9Y597 815 aa15.33■□□□□ 0.04
MRPL55-226ENST00000473066 DNMT3AQ9Y6K1 912 aaPredicted RBP15.33■□□□□ 0.04
MRPL55-226ENST00000473066 KLHL33A6NCF5 533 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 NVLO15381 856 aaKnown RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 POP7O75817 140 aaKnown RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 HOXB3P14651 431 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 AMD1P17707 334 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 XRCC1P18887 633 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 MPSTP25325 297 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 CD82P27701 267 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 MC4RP32245 332 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 CTSCP53634 463 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 DMPKQ09013 629 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 OASLQ15646 514 aaKnown RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 ZRANB3Q5FWF4 1079 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 WDR74Q6RFH5 385 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 ABRAXAS1Q6UWZ7 409 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 ZNF574Q6ZN55 896 aaPredicted RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 GPR155Q7Z3F1 870 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 SNX20Q7Z614 316 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 C11orf96Q7Z7L8 435 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 FAM129CQ86XR2 697 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 PLXDC1Q8IUK5 500 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 USP7Q93009 1102 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 DNAJC1Q96KC8 554 aaKnown RBP15.32■□□□□ 0.04
MRPL55-226ENST00000473066 COPS8Q99627 209 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 TBC1D10AQ9BXI6 508 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 FAM8A1Q9UBU6 413 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 PPP2R2CQ9Y2T4 447 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 PCDHB11Q9Y5F2 797 aa15.32■□□□□ 0.04
MRPL55-226ENST00000473066 SDK2Q58EX2 2172 aa15.31■□□□□ 0.04
MRPL55-226ENST00000473066 CACNA1GO43497 2377 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms