RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ARNTP27540 789 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 ARCN1P48444 511 aaKnown RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 TTPAP49638 278 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 ILKQ13418 452 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 MSS51Q4VC12 460 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 GLE1Q53GS7 698 aaKnown RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 MRNIPQ6NTE8 343 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 DET1Q7L5Y6 550 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 C11orf96Q7Z7L8 435 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 SDCCAG8Q86SQ7 713 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 AMZ2Q86W34 360 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 SLC35F3Q8IY50 421 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 GPR156Q8NFN8 814 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 ZNF669Q96BR6 464 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 LINC00615Q96LM1 132 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 FCRL3Q96P31 734 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 KLC4Q9NSK0 619 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 GRHL1Q9NZI5 618 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 GULP1Q9UBP9 304 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 SLC23A2Q9UGH3 650 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 KCNK6Q9Y257 313 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 PCDHGA1Q9Y5H4 931 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 ARID1BQ8NFD5 2236 aaPredicted RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 DNAH14Q0VDD8 3507 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 TDRD6O60522 2096 aaKnown RBP20.47■□□□□ 0.87
TOP3A-204ENST00000472959 PCNX2A6NKB5 2137 aa20.47■□□□□ 0.87
TOP3A-204ENST00000472959 CNOT1A5YKK6 2376 aaKnown RBP20.46■□□□□ 0.87
TOP3A-204ENST00000472959 LY6G6EA0A0G2JKS1 128 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 ZCWPW2A0A1B0GU75 182 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 F8W8V4 182 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 QSOX1O00391 747 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 CDK4P11802 303 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 KCNA4P22459 653 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 PRLHRP49683 370 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 DMPKQ09013 629 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 DNAJC3Q13217 504 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 MICALCLQ6ZW33 695 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 KYQ8NBH2 561 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 NOA1Q8NC60 698 aaKnown RBP20.46■□□□□ 0.87
TOP3A-204ENST00000472959 OR6C4Q8NGE1 309 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 GPR150Q8NGU9 434 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 ZDHHC1Q8WTX9 485 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 NAT6Q93015 286 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 TCF12Q99081 682 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 VPS37BQ9H9H4 285 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 SIRPGQ9P1W8 387 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 PADI4Q9UM07 663 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 FAM169AQ9Y6X4 670 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 U3KQA8 63 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 SPTBN4Q9H254 2564 aa20.46■□□□□ 0.87
TOP3A-204ENST00000472959 MYLKQ15746 1914 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 MGAT4DA6NG13 374 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 PRR19A6NJB7 356 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 ESPNB1AK53 854 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 B4DGG1 531 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 PFDN6O15212 129 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 SGTAO43765 313 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 NOBOXO60393 691 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 GSTM1P09488 218 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 SLC2A4P14672 509 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 PMLP29590 882 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 ACADVLP49748 655 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 SLC7A5Q01650 507 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 GSTM4Q03013 218 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 LONRF1Q17RB8 773 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 PLA2G4EQ3MJ16 856 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 C14orf28Q4W4Y0 310 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 NEPROQ6NW34 567 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 OTUD6BQ8N6M0 293 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.45■□□□□ 0.86
TOP3A-204ENST00000472959 SEC14L1Q92503 715 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 ART4Q93070 314 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 PWWP2AQ96N64 755 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 TRIM56Q9BRZ2 755 aaKnown RBP20.45■□□□□ 0.86
TOP3A-204ENST00000472959 TOR4AQ9NXH8 423 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 MARCH4Q9P2E8 410 aaPredicted RBP20.45■□□□□ 0.86
TOP3A-204ENST00000472959 TBC1D29Q9UFV1 150 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 TEX264Q9Y6I9 313 aa20.45■□□□□ 0.86
TOP3A-204ENST00000472959 EME2A4GXA9 379 aaPredicted RBP20.44■□□□□ 0.86
TOP3A-204ENST00000472959 OR5K4A6NMS3 321 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 E7ESA3 106 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 DKK1O94907 266 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 GP1BAP07359 652 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 FTH1P19P0C7X4 201 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 IDSP22304 550 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 ELK3P41970 407 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 THOC5Q13769 683 aaKnown RBP20.44■□□□□ 0.86
TOP3A-204ENST00000472959 SEMA3AQ14563 771 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 SPANXN3Q5MJ09 141 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 RNF187Q5TA31 235 aaPredicted RBP20.44■□□□□ 0.86
TOP3A-204ENST00000472959 WASH2PQ6VEQ5 465 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 CENPUQ71F23 418 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 SLCO6A1Q86UG4 719 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 C17orf82Q86X59 251 aaPredicted RBP20.44■□□□□ 0.86
TOP3A-204ENST00000472959 LMNTD2Q8IXW0 634 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 CLDN19Q8N6F1 224 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 OR2L2Q8NH16 312 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 CCDC97Q96F63 343 aaPredicted RBP20.44■□□□□ 0.86
TOP3A-204ENST00000472959 CARD6Q9BX69 1037 aa20.44■□□□□ 0.86
TOP3A-204ENST00000472959 OSGEPL1Q9H4B0 414 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms