RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 KCTD5Q9NXV2 234 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 PKD2L2Q9NZM6 624 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 SIRPGQ9P1W8 387 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 ASIC3Q9UHC3 531 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 FEZ2Q9UHY8 353 aaPredicted RBP9.06□□□□□ -0.96
SMC4-213ENST00000472282 SATB2Q9UPW6 733 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 ENTPD2Q9Y5L3 495 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 MRFAP1Q9Y605 127 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 ARL5AQ9Y689 179 aa9.06□□□□□ -0.96
SMC4-213ENST00000472282 TCRBV7S3A2A0A539 114 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 TOR1BO14657 336 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 TTI1O43156 1089 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 TMEM63AO94886 807 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 RASGRP1O95267 797 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 FUCA1P04066 466 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 ANXA6P08133 673 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 TPH1P17752 444 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 DEKP35659 375 aaKnown RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 SPINT3P49223 89 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 SRP54P61011 504 aaKnown RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 MRPS25P82663 173 aaKnown RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 VAC14Q08AM6 782 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 CDH17Q12864 832 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 MSLNQ13421 630 aaPredicted RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 MTM1Q13496 603 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 SEPT6Q14141 434 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 DHX34Q14147 1143 aaKnown RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 KCNJ11Q14654 390 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 POU6F1Q14863 301 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 TAF1AQ15573 450 aaPredicted RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 WHAMMP3Q1A5X7 153 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 C3orf38Q5JPI3 329 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 ANKRD22Q5VYY1 191 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 ALS2CLQ60I27 953 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 RAET1GQ6H3X3 334 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 ZNF765Q7L2R6 523 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 ZNF572Q7Z3I7 529 aaPredicted RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 TMC3Q7Z5M5 1100 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 DNAAF3Q8N9W5 541 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 PLPP7Q8NBV4 271 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 GPR26Q8NDV2 337 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 CPT1BQ92523 772 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 FGF11Q92914 225 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 SCAMP4Q969E2 229 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 AP2M1Q96CW1 435 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 TBATAQ96M53 351 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 WDR92Q96MX6 357 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 AGAP2Q99490 1192 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 CCDC3Q9BQI4 270 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 RIOK2Q9BVS4 552 aaKnown RBP9.05□□□□□ -0.96
SMC4-213ENST00000472282 ABCG4Q9H172 646 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 PRORYQ9H606 182 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 BPIFA1Q9NP55 256 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 ASCL3Q9NQ33 180 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 CASS4Q9NQ75 786 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.05□□□□□ -0.96
SMC4-213ENST00000472282 GULP1Q9UBP9 304 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 KLQ9UEF7 1012 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 PADI4Q9UM07 663 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 PTPRQQ9UMZ3 2332 aa9.05□□□□□ -0.96
SMC4-213ENST00000472282 LAMA5O15230 3695 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 A0A1W2PQM1 296 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 CCDC78A2IDD5 438 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 C2orf81A6NN90 581 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 DNALI1O14645 258 aaPredicted RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 STX7O15400 261 aaKnown RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 RAD51CO43502 376 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 SOD1P00441 154 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 CTSEP14091 401 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 BPIP17213 487 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 HMGCLP35914 325 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 ADCY8P40145 1251 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 MAGEA6P43360 314 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 GPR1P46091 355 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 LSSP48449 732 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 KIAA1024LP59773 190 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 DCDC1P59894 354 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 TLE3Q04726 772 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 DPTQ07507 201 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 PTPRCAPQ14761 206 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 CERCAMQ5T4B2 595 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 HENMT1Q5T8I9 393 aaKnown RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 IZUMO3Q5VZ72 239 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 PNCKQ6P2M8 343 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 SYDE1Q6ZW31 735 aaPredicted RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 ZNF534Q76KX8 674 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 B3GNT8Q7Z7M8 397 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 HEATR4Q86WZ0 1026 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 SPACA3Q8IXA5 215 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 RAVER1Q8IY67 606 aaKnown RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 NRSN1Q8IZ57 195 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 FSTL5Q8N475 847 aaPredicted RBP9.04□□□□□ -0.96
SMC4-213ENST00000472282 ARL10Q8N8L6 244 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 OR13C4Q8NGS5 318 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 BRSK1Q8TDC3 778 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 CCDC74AQ96AQ1 378 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 HIC2Q96JB3 615 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 TMEM168Q9H0V1 697 aa9.04□□□□□ -0.96
SMC4-213ENST00000472282 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms