RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 VPS39Q96JC1 886 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 CCM2Q9BSQ5 444 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 BOCQ9BWV1 1114 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 RHOJQ9H4E5 214 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 FETUBQ9UGM5 382 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 SLC24A2Q9UI40 661 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 SLCO1B1Q9Y6L6 691 aa16.63■□□□□ 0.25
CCM2-205ENST00000472223 VPS26AO75436 327 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 KRT37O76014 449 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 TRIM16O95361 564 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 CER1O95813 267 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 JUNDP17535 347 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 NBL1P41271 181 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 HK3P52790 923 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 LRP8Q14114 963 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 FZD2Q14332 565 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 TMED2Q15363 201 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 INSCQ1MX18 579 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 BCL7AQ4VC05 210 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 BEND6Q5SZJ8 279 aaPredicted RBP16.62■□□□□ 0.25
CCM2-205ENST00000472223 FAM45BPQ6NSW5 357 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 CNSTQ6PJW8 725 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 LAYNQ6UX15 382 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 CHST15Q7LFX5 561 aaPredicted RBP16.62■□□□□ 0.25
CCM2-205ENST00000472223 AMZ2Q86W34 360 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 PHACTR4Q8IZ21 702 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 FAM45AQ8TCE6 357 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 TSPAN17Q96FV3 270 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 ATXN7L3BQ96GX2 97 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 ELMO2Q96JJ3 720 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 OR2M4Q96R27 311 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 PAFAH2Q99487 392 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 FGF22Q9HCT0 170 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 SMYD2Q9NRG4 433 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 GPR27Q9NS67 375 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 TAS2R13Q9NYV9 303 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 SPASTQ9UBP0 616 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 DOLKQ9UPQ8 538 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 DGKBQ9Y6T7 804 aa16.62■□□□□ 0.25
CCM2-205ENST00000472223 IQANK1A0A1B0GTG1 560 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 CHUKO15111 745 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 YKT6O15498 198 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 DNAJC6O75061 913 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 POP7O75817 140 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 PIAS1O75925 651 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 CSF2P04141 144 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 NUDT17P0C025 328 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 CA5AP35218 305 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 SKIV2L2P42285 1042 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 PRLHRP49683 370 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 B4GALNT1Q00973 533 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 ILF3Q12906 894 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCM2-205ENST00000472223 EFTUD2Q15029 972 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCM2-205ENST00000472223 ELOCQ15369 112 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 ALG11Q2TAA5 492 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 KIF19Q2TAC6 998 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 TTLL9Q3SXZ7 439 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 SYTL3Q4VX76 610 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 PYCR3Q53H96 274 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 OTOAQ7RTW8 1153 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 HDXQ7Z353 690 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 ZC3HC1Q86WB0 502 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 SLC44A1Q8WWI5 657 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 OR1E3Q8WZA6 343 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 RBBP8Q99708 897 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 GSDMCQ9BYG8 508 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 ROPN1BQ9BZX4 212 aaPredicted RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 P2RY12Q9H244 342 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 ROPN1Q9HAT0 212 aaPredicted RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 MRPL40Q9NQ50 206 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 FAM86C1Q9NVL1 165 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 TRNAU1APQ9NX07 287 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 SLC17A6Q9P2U8 582 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 APOBEC3BQ9UH17 382 aaKnown RBP16.61■□□□□ 0.25
CCM2-205ENST00000472223 ZNF180Q9UJW8 692 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 PLAAQ9Y263 795 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 VWA7Q9Y334 891 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 SNX11Q9Y5W9 270 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 PI4KAP42356 2102 aa16.61■□□□□ 0.25
CCM2-205ENST00000472223 RALGAPA1Q6GYQ0 2036 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 BPTFQ12830 3046 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 C17orf113A0A1B0GUU1 675 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 TLDC2A0PJX2 215 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 ARHGAP33O14559 1287 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 FOXD2O60548 495 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 APOA4P06727 396 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 NME1P15531 152 aaKnown RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 SAT1P21673 171 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 PBLDP30039 288 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 CTSKP43235 329 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 POU4F1Q01851 419 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 PLOD1Q02809 727 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 ZNF789Q5FWF6 425 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 MICALCLQ6ZW33 695 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 SDR16C5Q8N3Y7 309 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 FSTL5Q8N475 847 aaPredicted RBP16.6■□□□□ 0.25
CCM2-205ENST00000472223 PNPLA1Q8N8W4 532 aa16.6■□□□□ 0.25
CCM2-205ENST00000472223 SUMF1Q8NBK3 374 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms