RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RGSL1A5PLK6 1076 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MT-ND1P03886 318 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PGAM2P15259 253 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF8P17098 575 aaPredicted RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCKBRP32239 447 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GRK5P34947 590 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AP2S1P53680 142 aaPredicted RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MXD1Q05195 221 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RASGEF1BQ0VAM2 473 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ATP13A5Q4VNC0 1218 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DCLRE1AQ6PJP8 1040 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FIP1L1Q6UN15 594 aaKnown RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C11orf65Q8NCR3 313 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 HDAC7Q8WUI4 952 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MRPL45Q9BRJ2 306 aaKnown RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GTF3C1Q12789 2109 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FOSL1P15407 271 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ECHS1P30084 290 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TIE1P35590 1138 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SLC1A2P43004 574 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MLIPQ5VWP3 458 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MOXD1Q6UVY6 613 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ATAD1Q8NBU5 361 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SLC25A36Q96CQ1 311 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DNAJC28Q9NX36 388 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CDK16Q00536 496 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 COL9A2Q14055 689 aaPredicted RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PIWIL2Q8TC59 973 aaKnown RBP13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CITED4Q96RK1 184 aa13.14□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 A0A0G2JN53 185 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ALG10BQ5I7T1 473 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GPR139Q6DWJ6 353 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SSX6Q7RTT6 188 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TMC8Q8IU68 726 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 UROC1Q96N76 676 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TEFMQ96QE5 360 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MRPL57Q9BQC6 102 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PDCD5O14737 125 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IDSP22304 550 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 GNPDA1P46926 289 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAPK12P53778 367 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAP2K5Q13163 448 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 HKDC1Q2TB90 917 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 BROXQ5VW32 411 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MBOAT7Q96N66 472 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 B3GNT4Q9C0J1 378 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PLCL2Q9UPR0 1127 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CNTNAP1P78357 1384 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DISP1Q96F81 1524 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 SCO1O75880 301 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IL33O95760 270 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAN2A2P49641 1150 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CLCN5P51795 746 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ANKRD34BA5PLL1 514 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 B4GALT5O43286 388 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PIP5K1CO60331 668 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LRIG2O94898 1065 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 ZNF823P16415 610 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TMEM164Q5U3C3 297 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 VCPIP1Q96JH7 1222 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AGO3Q9H9G7 860 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 TMEM51Q9NW97 253 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 WASHC1A8K0Z3 465 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 WASH3PC4AMC7 463 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 EIF1AXP47813 144 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 WASH2PQ6VEQ5 465 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 HTRA1Q92743 480 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 APBB2Q92870 758 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 B4DGG1 531 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 AHCYL1O43865 530 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CMPK1P30085 196 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 NUP54Q7Z3B4 507 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 LRRC20Q8TCA0 184 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 PTCD3Q96EY7 689 aaKnown RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CLDND1Q9NY35 253 aa13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAGED1Q9Y5V3 778 aaPredicted RBP13.13□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 FCER2P06734 321 aa13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 IL7RP16871 459 aa13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MTHFRP42898 656 aa13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 MAMLD1Q13495 774 aa13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 CCDC80Q76M96 950 aa13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 EIF1ADQ8N9N8 165 aaKnown RBP13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 C1orf216Q8TAB5 229 aa13.12□□□□□ -0.31
NPHP3-ACAD11-201ENST00000471702 BAP1Q92560 729 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms