RNA–Protein interactions for RNA: ENST00000468086.1

RBM39-226, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-226	ENST00000468086	DBNL	Q9UJU6	430 aa	Known RBP	4.2	□□□□□ -1.74
RBM39-226	ENST00000468086	ACAD8	Q9UKU7	415 aa		4.2	□□□□□ -1.74
RBM39-226	ENST00000468086		A0A0G2JLW4	131 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	CCDC189	A1A4V9	331 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086		F5H0A9	414 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	TMEM178B	H3BS89	294 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	CREB3	O43889	395 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	GPC4	O75487	556 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	RNASEH2A	O75792	299 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	LAMP2	P13473	410 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	HOXA13	P31271	388 aa	Predicted RBP	4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	GALC	P54803	685 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	GAGE2B	Q13066	116 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	EIF4A2	Q14240	407 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	MED22	Q15528	200 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	ZSCAN23	Q3MJ62	389 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	GAGE2E	Q4V326	116 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	JADE1	Q6IE81	842 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	GAGE2A	Q6NT46	116 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	ARHGAP11A	Q6P4F7	1023 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	DGLUCY	Q7Z3D6	616 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	TICAM1	Q8IUC6	712 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	C1orf52	Q8N6N3	182 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	PDILT	Q8N807	584 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	PPHLN1	Q8NEY8	458 aa	Known RBP	4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	TAS1R2	Q8TE23	839 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	SMPDL3B	Q92485	455 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	NEUROD6	Q96NK8	337 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	LITAF	Q99732	161 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	C2orf42	Q9NWW7	574 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	GAGE2D	Q9UEU5	116 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	PIAS3	Q9Y6X2	628 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	KIF26B	Q2KJY2	2108 aa		4.19	□□□□□ -1.74
RBM39-226	ENST00000468086	OGG1	O15527	345 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	WISP2	O76076	250 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	KCNK5	O95279	499 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	BMP10	O95393	424 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	HRH2	P25021	359 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	HOXC8	P31273	242 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	MSH2	P43246	934 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	GPR143	P51810	404 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	RARS2	Q5T160	578 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	ZDHHC20	Q5W0Z9	365 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	TMEM154	Q6P9G4	183 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	PXK	Q7Z7A4	578 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	TRPT1	Q86TN4	253 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	TMEM190	Q8WZ59	177 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	OR2A14	Q96R47	310 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	SMC6	Q96SB8	1091 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	C1QTNF1	Q9BXJ1	281 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	SH2D4A	Q9H788	454 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	APOBEC3G	Q9HC16	384 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	TRPC7	Q9HCX4	862 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	ADPRHL2	Q9NX46	363 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	ORC3	Q9UBD5	711 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-226	ENST00000468086	JRKL	Q9Y4A0	524 aa		4.18	□□□□□ -1.74
RBM39-226	ENST00000468086		A0A087X0M5	115 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086		A0A1B0GX30	115 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	ZBTB43	O43298	467 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	ZNF217	O75362	1048 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	TBX18	O95935	607 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	SCGB1D1	O95968	90 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	PATE4	P0C8F1	98 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	ERVK-10	P10266	1014 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	SELL	P14151	372 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	ANXA7	P20073	488 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	CHRNB4	P30926	498 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	MAN1A1	P33908	653 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	MBTD1	Q05BQ5	628 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	MAMLD1	Q13495	774 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	CRYM	Q14894	314 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	FCN2	Q15485	313 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	RBMS3	Q6XE24	437 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	GALNT5	Q7Z7M9	940 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	APLF	Q8IW19	511 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	GSDMB	Q8TAX9	411 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	OXNAD1	Q96HP4	312 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	PGAM5	Q96HS1	289 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	DACH2	Q96NX9	599 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	GFI1	Q99684	422 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	OLA1	Q9NTK5	396 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	C2CD2	Q9Y426	696 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	LYVE1	Q9Y5Y7	322 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	SNED1	Q8TER0	1413 aa		4.17	□□□□□ -1.74
RBM39-226	ENST00000468086	RUSC2	Q8N2Y8	1516 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	OR2M5	A3KFT3	312 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	TMEM8B	A6NDV4	472 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086		A8MZ25	164 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	PLPP2	O43688	288 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	HS6ST1	O60243	411 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	LDLR	P01130	860 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	LIPF	P07098	398 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	PRSS56	P0CW18	603 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	IGHV4-38-2	P0DP08	117 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	MSH3	P20585	1137 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	ARL3	P36405	182 aa		4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	DRG2	P55039	364 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-226	ENST00000468086	MEP1A	Q16819	746 aa		4.16	□□□□□ -1.74

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