RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CDK3Q00526 305 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 B4GALNT1Q00973 533 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ANGPT1Q15389 498 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 KRT71Q3SY84 523 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 LRIG3Q6UXM1 1119 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 SLC36A4Q6YBV0 504 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 GALNT7Q86SF2 657 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ZC3HC1Q86WB0 502 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 CLDN19Q8N6F1 224 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TMEM145Q8NBT3 493 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 DENND6BQ8NEG7 585 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 DDHD1Q8NEL9 900 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 LPGAT1Q92604 370 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 FUBP1Q96AE4 644 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 NACC2Q96BF6 587 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ULK4Q96C45 1275 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 SERAC1Q96JX3 654 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 HSPA12BQ96MM6 686 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TCF12Q99081 682 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TTC1Q99614 292 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 COPS8Q99627 209 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ORAI3Q9BRQ5 295 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ROPN1BQ9BZX4 212 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 WDR26Q9H7D7 661 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 VIPAS39Q9H9C1 493 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ROPN1Q9HAT0 212 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 INTS10Q9NVR2 710 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 EURLQ9NYK6 297 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PSMC3IPQ9P2W1 217 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 SLC24A2Q9UI40 661 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 CORO1CQ9ULV4 474 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ATXN2Q99700 1313 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 IGLV3-16A0A075B6K0 115 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 HMX2A2RU54 273 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PRR33A8MZF0 331 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 AGPSO00116 658 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 FPGTO14772 594 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PFDN6O15212 129 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF7P17097 686 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 MAOBP27338 520 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 AKT1P31749 480 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 AKT2P31751 481 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PPARGP37231 505 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 NSG1P42857 185 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PTGER3P43115 390 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 LIMK2P53671 638 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 BMPR2Q13873 1038 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 LDLRAP1Q5SW96 308 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 RNF187Q5TA31 235 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 GRTP1Q5TC63 336 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 MROH9Q5TGP6 573 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ADAMTSL4Q6UY14 1074 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 GCNT7Q6ZNI0 430 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TDRPQ86YL5 185 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 KIRREL3Q8IZU9 778 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 RBFAQ8N0V3 343 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 HIC2Q96JB3 615 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 VPS39Q96JC1 886 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 BIRC8Q96P09 236 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PCED1AQ9H1Q7 454 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 RHOJQ9H4E5 214 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PPCSQ9HAB8 311 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ZDHHC3Q9NYG2 299 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 EIF2B4Q9UI10 523 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF180Q9UJW8 692 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 VPS9D1Q9Y2B5 631 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 OAS3Q9Y6K5 1087 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 MEI4A8MW99 385 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PRAMEF26H0Y7S4 382 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PRMT5O14744 637 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 LRP4O75096 1905 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ITGA2BP08514 1039 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 FMO4P31512 558 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 SPRP35270 261 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 CSE1LP55060 971 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TMEM115Q12893 351 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ITIH4Q14624 930 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TMED2Q15363 201 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 RBM20Q5T481 1227 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 LYPLAL1Q5VWZ2 237 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 DET1Q7L5Y6 550 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 GALNT15Q8N3T1 639 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 ACVR1CQ8NER5 493 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 GAB3Q8WWW8 586 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 FOXJ1Q92949 421 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 COX14Q96I36 57 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 BMFQ96LC9 184 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 NDNQ99608 321 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TMEM109Q9BVC6 243 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 TEX101Q9BY14 249 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 FAM126AQ9BYI3 521 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 DUSP15Q9H1R2 295 aaPredicted RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 CENPHQ9H3R5 247 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 DMTF1Q9Y222 760 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 MTO1Q9Y2Z2 717 aaKnown RBP6.78□□□□□ -1.32
SCAF4-204ENST00000467731 CABIN1Q9Y6J0 2220 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 PRSS21Q9Y6M0 314 aa6.78□□□□□ -1.32
SCAF4-204ENST00000467731 OR2AG2A6NM03 316 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms