RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 KLHL20Q9Y2M5 609 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 PIP5K1BO14986 540 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 PEX1O43933 1283 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 MSX2P35548 267 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 RPL26P61254 145 aaKnown RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 XIAPP98170 497 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 GNA13Q14344 377 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 VPS26BQ4G0F5 336 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TMEM220Q6QAJ8 160 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 PPM1MQ96MI6 270 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 EBF4Q9BQW3 602 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 DENND2DQ9H6A0 471 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TLR9Q9NR96 1032 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF229Q9UJW7 825 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 ANGPT4Q9Y264 503 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 BACE2Q9Y5Z0 518 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 H3BN98 237 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 HAS3O00219 553 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 COCHO43405 550 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 TRBC1P01850 177 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 UGT1A6P19224 532 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 UGT1A1P22309 533 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 UGT1A4P22310 534 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 UGT1A3P35503 534 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 UGT1A5P35504 534 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CHIT1Q13231 466 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 INO80DQ53TQ3 878 aaPredicted RBP13.65□□□□□ -0.22
BRAT1-203ENST00000467558 SPESP1Q6UW49 350 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CASP12Q6UXS9 341 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CLPTM1LQ96KA5 538 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 PGAP2Q9UHJ9 254 aa13.65□□□□□ -0.22
BRAT1-203ENST00000467558 CYP7B1O75881 506 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ATP6V1C1P21283 382 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ECHS1P30084 290 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 IFNGR2P38484 337 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 PEX6Q13608 980 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CCDC85BQ15834 202 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 RINLQ6ZS11 566 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CYP4Z2PQ8N1L4 340 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ESAMQ96AP7 390 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 DTNBP1Q96EV8 351 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 HERPUD2Q9BSE4 406 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 SPATA5L1Q9BVQ7 753 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ZDHHC3Q9NYG2 299 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 SUFUQ9UMX1 484 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 EIF2S1P05198 315 aaKnown RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ALPIP09923 528 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 RGS1Q08116 209 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 DEPDC1Q5TB30 811 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ZC3H7AQ8IWR0 971 aaKnown RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 COLGALT2Q8IYK4 626 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 TBC1D21Q8IYX1 336 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 SVOPQ8N4V2 548 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CLHC1Q8NHS4 586 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CENPIQ92674 756 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 PSKH2Q96QS6 385 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 S100A14Q9HCY8 104 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 NDOR1Q9UHB4 597 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 TNRC6CQ9HCJ0 1690 aaKnown RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 KRT87PA6NCN2 255 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ITGA2P17301 1181 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ZBTB6Q15916 424 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CYS1Q717R9 158 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 C8orf59Q8N0T1 100 aaPredicted RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 AHI1Q8N157 1196 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CELF5Q8N6W0 485 aaKnown RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 RAD51AP1Q96B01 352 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 CADM1Q9BY67 442 aaKnown RBP13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 RHBGQ9H310 441 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 ZNF232Q9UNY5 417 aa13.64□□□□□ -0.23
BRAT1-203ENST00000467558 A8MT66 165 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 WNT9AO14904 365 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 FFAR2O15552 330 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 DLX3O60479 287 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 FAM20BO75063 409 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 ERAL1O75616 437 aaKnown RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PDGFRLQ15198 375 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 RTP2Q5QGT7 225 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 LPCAT2Q7L5N7 544 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CILP2Q8IUL8 1156 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 RERGQ96A58 199 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PSAT1Q9Y617 370 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 MYH15Q9Y2K3 1946 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 IQCF5A8MTL0 148 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 K7EPI3 171 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 TYROBPO43914 113 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 KERAO60938 352 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CSF2RAP15509 400 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 SSR2P43308 183 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CCNHP51946 323 aaPredicted RBP13.63□□□□□ -0.23
BRAT1-203ENST00000467558 CHN2P52757 468 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 STC1P52823 247 aa13.63□□□□□ -0.23
BRAT1-203ENST00000467558 PNLIPRP1P54315 467 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms