RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TOR1BO14657 336 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 CNMDO75829 334 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 CST1P01037 141 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 RPS17P08708 135 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 CES1P23141 567 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 PPP5CP53041 499 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 EMX1Q04741 257 aaPredicted RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 ADPRMQ3LIE5 342 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 ZC3H12BQ5HYM0 836 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 NOMO2Q5JPE7 1267 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 WSCD1Q658N2 575 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 UGT3A1Q6NUS8 523 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 DLEU7Q6UYE1 221 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 RBM23Q86U06 439 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 SLC22A16Q86VW1 577 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 FBXO39Q8N4B4 442 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 OR8J3Q8NGG0 315 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 DYNC2LI1Q8TCX1 351 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 FBLIM1Q8WUP2 373 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 KIAA1191Q96A73 305 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 PABPC5Q96DU9 382 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 IMP4Q96G21 291 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 C16orf70Q9BSU1 422 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 C1QTNF3Q9BXJ4 246 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 VTA1Q9NP79 307 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 CRTAC1Q9NQ79 661 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 SYCE1LA8MT33 242 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 H3BRB1 525 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 SLC16A6O15403 523 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 MLYCDO95822 493 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 ZNF286BP0CG31 522 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 SLC2A3P11169 496 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 PCNAP12004 261 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 HOXB6P17509 224 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 AGXTP21549 392 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 NFKBIAP25963 317 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 BRMS1LQ5PSV4 323 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 AFMIDQ63HM1 303 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 P2RY8Q86VZ1 359 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 LGI2Q8N0V4 545 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 PROKR1Q8TCW9 393 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 GIPC2Q8TF65 315 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 PEX13Q92968 403 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 GLMNQ92990 594 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 YIPF6Q96EC8 236 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 TRIT1Q9H3H1 467 aaKnown RBP19.53■□□□□ 0.72
SDF4-205ENST00000465727 EHD1Q9H4M9 534 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 PIF1Q9H611 641 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 SMURF2Q9HAU4 748 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 CRYL1Q9Y2S2 319 aa19.53■□□□□ 0.72
SDF4-205ENST00000465727 SLC4A1P02730 911 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 MANEALQ5VSG8 457 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 ZNF549Q6P9A3 640 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 DSG4Q86SJ6 1040 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 OR52E4Q8NGH9 312 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 GPR150Q8NGU9 434 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 NDNFQ8TB73 568 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 EMID1Q96A84 441 aaPredicted RBP19.52■□□□□ 0.72
SDF4-205ENST00000465727 ASPSCR1Q9BZE9 553 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 CCDC90BQ9GZT6 254 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 SIK2Q9H0K1 926 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 R3HDMLQ9H3Y0 253 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 SYTL2Q9HCH5 934 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 SEMA4BQ9NPR2 832 aaPredicted RBP19.52■□□□□ 0.72
SDF4-205ENST00000465727 PAK1IP1Q9NWT1 392 aaPredicted RBP19.52■□□□□ 0.72
SDF4-205ENST00000465727 KLK14Q9P0G3 267 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 FNIP2Q9P278 1114 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 MARCH4Q9P2E8 410 aaPredicted RBP19.52■□□□□ 0.72
SDF4-205ENST00000465727 ZNF229Q9UJW7 825 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 ANKRD36A6QL64 1941 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 UTRNP46939 3433 aa19.52■□□□□ 0.72
SDF4-205ENST00000465727 ANKRD12Q6UB98 2062 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 HHLA1C9JL84 531 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 PTGES3LE9PB15 166 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 STX16O14662 325 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 NUAK1O60285 661 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 DPEP1P16444 411 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 IL12AP29459 219 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 TIAL1Q01085 375 aaKnown RBP eCLIP19.52■□□□□ 0.71
SDF4-205ENST00000465727 PIGFQ07326 219 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 CLPPQ16740 277 aaPredicted RBP19.52■□□□□ 0.71
SDF4-205ENST00000465727 MRNIPQ6NTE8 343 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 NECAB2Q7Z6G3 386 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 LDB1Q86U70 411 aaPredicted RBP19.52■□□□□ 0.71
SDF4-205ENST00000465727 AKAP14Q86UN6 197 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 RALGPS2Q86X27 583 aaPredicted RBP19.52■□□□□ 0.71
SDF4-205ENST00000465727 SLC7A5P1Q8MH63 180 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 RHOXF1Q8NHV9 184 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 POP5Q969H6 163 aaKnown RBP19.52■□□□□ 0.71
SDF4-205ENST00000465727 ZNF300Q96RE9 604 aaPredicted RBP19.52■□□□□ 0.71
SDF4-205ENST00000465727 INTS6Q9UL03 887 aaKnown RBP19.52■□□□□ 0.71
SDF4-205ENST00000465727 RNF112Q9ULX5 631 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 GINS2Q9Y248 185 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 PPP2R3BQ9Y5P8 575 aa19.52■□□□□ 0.71
SDF4-205ENST00000465727 SUPT3HB4E1H0 165 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 AREL1O15033 823 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 CNTN5O94779 1100 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 GLP2RO95838 553 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 IGLV3-25P01717 112 aa19.51■□□□□ 0.71
SDF4-205ENST00000465727 LHX1P48742 406 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms