RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TRA2AQ13595 282 aaKnown RBP eCLIP21.42■■□□□ 1.02
LIME1-203ENST00000465591 ARHGAP40Q5TG30 622 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 ZFAND4Q86XD8 727 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 ZNF398Q8TD17 642 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 AHCYL2Q96HN2 611 aaKnown RBP21.42■■□□□ 1.02
LIME1-203ENST00000465591 TMEM121Q9BTD3 319 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 SMOXQ9NWM0 555 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.42■■□□□ 1.02
LIME1-203ENST00000465591 OGFRQ9NZT2 677 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 WDR37Q9Y2I8 494 aa21.42■■□□□ 1.02
LIME1-203ENST00000465591 FASNP49327 2511 aaKnown RBP21.42■■□□□ 1.02
LIME1-203ENST00000465591 OR52A4PA6NMU1 304 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 C2orf81A6NN90 581 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 PDZK1P1A8MUH7 402 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 EFSO43281 561 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 PRAMEF1O95521 474 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 XRCC1P18887 633 aaPredicted RBP21.41■■□□□ 1.02
LIME1-203ENST00000465591 ZNF140P52738 457 aaPredicted RBP21.41■■□□□ 1.02
LIME1-203ENST00000465591 GSDMDP57764 484 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 ITGA9Q13797 1035 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 GTF2H3Q13889 308 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 SNAP47Q5SQN1 464 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 LDLRAP1Q5SW96 308 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 ABRAXAS1Q6UWZ7 409 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 FAM83HQ6ZRV2 1179 aaPredicted RBP21.41■■□□□ 1.02
LIME1-203ENST00000465591 TAB3Q8N5C8 712 aaPredicted RBP21.41■■□□□ 1.02
LIME1-203ENST00000465591 BRSK1Q8TDC3 778 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 NCSTNQ92542 709 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 SH3KBP1Q96B97 665 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 DPYSL5Q9BPU6 564 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 STN1Q9H668 368 aaKnown RBP21.41■■□□□ 1.02
LIME1-203ENST00000465591 ARNT2Q9HBZ2 717 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 OCIAD1Q9NX40 245 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 SLC30A1Q9Y6M5 507 aa21.41■■□□□ 1.02
LIME1-203ENST00000465591 LILRA5A6NI73 299 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 OR2AG2A6NM03 316 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 A8MU76 341 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 GOLGA6L6A8MZA4 724 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 CCL22O00626 93 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 POP7O75817 140 aaKnown RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 SRP72O76094 671 aaKnown RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 PPM1FP49593 454 aaPredicted RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 EPHA4P54764 986 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 UCNP55089 124 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 TMPRSS15P98073 1019 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 CLCA4Q14CN2 919 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 PARP6Q2NL67 630 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 TMEM220Q6QAJ8 160 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 WDR74Q6RFH5 385 aaPredicted RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 PCSK4Q6UW60 755 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 ARHGEF18Q6ZSZ5 1173 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 TMEM26Q6ZUK4 368 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 BEND7Q8N7W2 519 aaPredicted RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 TTC25Q96NG3 672 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 UBL7Q96S82 380 aaPredicted RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 ZMYND15Q9H091 742 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 AKAP7Q9P0M2 348 aaPredicted RBP21.4■■□□□ 1.02
LIME1-203ENST00000465591 PIKFYVEQ9Y2I7 2098 aa21.4■■□□□ 1.02
LIME1-203ENST00000465591 LDB2O43679 373 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 IDSP22304 550 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 VAC14Q08AM6 782 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 AGAP9Q5VTM2 703 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 XKR5Q6UX68 686 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 WASH2PQ6VEQ5 465 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 DET1Q7L5Y6 550 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 ARHGAP22Q7Z5H3 698 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 AGBL5Q8NDL9 886 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.39■■□□□ 1.01
LIME1-203ENST00000465591 TSGA10Q9BZW7 698 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 ASB8Q9H765 288 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 WASH6PQ9NQA3 447 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 WDR70Q9NW82 654 aa21.39■■□□□ 1.01
LIME1-203ENST00000465591 PIH1D1Q9NWS0 290 aaKnown RBP21.39■■□□□ 1.01
LIME1-203ENST00000465591 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.39■■□□□ 1.01
LIME1-203ENST00000465591 ATMQ13315 3056 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 TEX51A0A1B0GUA7 166 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 ARHGAP6O43182 974 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 SGTAO43765 313 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 KRT86O43790 486 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 VIPP01282 170 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 LIPCP11150 499 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 TPH1P17752 444 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 CSTF2P33240 577 aaKnown RBP eCLIP21.38■■□□□ 1.01
LIME1-203ENST00000465591 GFERP55789 205 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 DMPKQ09013 629 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 NFE2L1Q14494 772 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 OASLQ15646 514 aaKnown RBP21.38■■□□□ 1.01
LIME1-203ENST00000465591 AMZ2Q86W34 360 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 DTX1Q86Y01 620 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 TRIM48Q8IWZ4 208 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 BMPERQ8N8U9 685 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 SNRNP27Q8WVK2 155 aaKnown RBP21.38■■□□□ 1.01
LIME1-203ENST00000465591 ART4Q93070 314 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 SGF29Q96ES7 293 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 PPP1R2P1Q96PQ5 205 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 ZCCHC2Q9C0B9 1178 aaKnown RBP21.38■■□□□ 1.01
LIME1-203ENST00000465591 FAM96AQ9H5X1 160 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 UCK1Q9HA47 277 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 KLHL3Q9UH77 587 aa21.38■■□□□ 1.01
LIME1-203ENST00000465591 B3GALT1Q9Y5Z6 326 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms