RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CES3Q6UWW8 571 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 AMZ2Q86W34 360 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 LMNTD2Q8IXW0 634 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 PIANPQ8IYJ0 282 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 CCL4L1Q8NHW4 92 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 NAT6Q93015 286 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 APOLD1Q96LR9 279 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 EBNA1BP2Q99848 306 aaKnown RBP19.51■□□□□ 0.71
COL9A3-204ENST00000463487 LRRC1Q9BTT6 524 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 TSSK1BQ9BXA7 367 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 FAM129AQ9BZQ8 928 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 KLC4Q9NSK0 619 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 SIRPGQ9P1W8 387 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 GULP1Q9UBP9 304 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 VPS9D1Q9Y2B5 631 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 PLXNB3Q9ULL4 1909 aa19.51■□□□□ 0.71
COL9A3-204ENST00000463487 EIF3HO15372 352 aaKnown RBP eCLIP19.5■□□□□ 0.717e-10■■□□□ 12.4
COL9A3-204ENST00000463487 CKMT1AP12532 417 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 CDKN1CP49918 316 aaPredicted RBP19.5■□□□□ 0.71
COL9A3-204ENST00000463487 CLCNKAP51800 687 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 PLA2G4EQ3MJ16 856 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 PPM1JQ5JR12 505 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 SPANXN3Q5MJ09 141 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 ZNF449Q6P9G9 518 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 CEP128Q6ZU80 1094 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 NRROSQ86YC3 692 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 AVL9Q8NBF6 648 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 ZDHHC1Q8WTX9 485 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 SGF29Q96ES7 293 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 TCF12Q99081 682 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 CARD6Q9BX69 1037 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 FOXP3Q9BZS1 431 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 STN1Q9H668 368 aaKnown RBP19.5■□□□□ 0.71
COL9A3-204ENST00000463487 CAAP1Q9H8G2 361 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 FAM114A2Q9NRY5 505 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 KCNK6Q9Y257 313 aa19.5■□□□□ 0.71
COL9A3-204ENST00000463487 CFAP54Q96N23 3096 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 ZW10O43264 779 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 NDUFS3O75489 264 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 POP7O75817 140 aaKnown RBP19.49■□□□□ 0.71
COL9A3-204ENST00000463487 FTH1P02794 183 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 OR56A5P0C7T3 313 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 IDSP22304 550 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 PRLHRP49683 370 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 CTSCP53634 463 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 PLTPP55058 493 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 SLC7A5Q01650 507 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 PDIA2Q13087 525 aaKnown RBP19.49■□□□□ 0.71
COL9A3-204ENST00000463487 ILKQ13418 452 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 ZNF547Q8IVP9 402 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 LINC00615Q96LM1 132 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-204ENST00000463487 FAM167BQ9BTA0 163 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 PHACTR1Q9C0D0 580 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 C20orf96Q9NUD7 363 aaPredicted RBP19.49■□□□□ 0.71
COL9A3-204ENST00000463487 ZC3H7BQ9UGR2 993 aaKnown RBP19.49■□□□□ 0.71
COL9A3-204ENST00000463487 PCDHGA1Q9Y5H4 931 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 FAM169AQ9Y6X4 670 aa19.49■□□□□ 0.71
COL9A3-204ENST00000463487 SPAARA0A1B0GVQ0 90 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 MGAT4DA6NG13 374 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 OR5K4A6NMS3 321 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 SNX2O60749 519 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 PRSS56P0CW18 603 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 OGNP20774 298 aaKnown RBP19.48■□□□□ 0.71
COL9A3-204ENST00000463487 ACP1P24666 158 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 PBLDP30039 288 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-204ENST00000463487 CA5AP35218 305 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 ELK3P41970 407 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 B4GALNT1Q00973 533 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 GUCY2DQ02846 1103 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 DMPKQ09013 629 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 CRYMQ14894 314 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 C14orf28Q4W4Y0 310 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 NEPROQ6NW34 567 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 OGFOD3Q6PK18 319 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 LRRC6Q86X45 466 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 SLC35F3Q8IY50 421 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 BEND7Q8N7W2 519 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-204ENST00000463487 KYQ8NBH2 561 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 NOA1Q8NC60 698 aaKnown RBP19.48■□□□□ 0.71
COL9A3-204ENST00000463487 GPR150Q8NGU9 434 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 ART4Q93070 314 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 TSPYL1Q9H0U9 437 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 SPATS2LQ9NUQ6 558 aaKnown RBP19.48■□□□□ 0.71
COL9A3-204ENST00000463487 GRHL1Q9NZI5 618 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 PADI4Q9UM07 663 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 CHMP2BQ9UQN3 213 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 DNAJC16Q9Y2G8 782 aa19.48■□□□□ 0.71
COL9A3-204ENST00000463487 PCYT1BQ9Y5K3 369 aaPredicted RBP19.48■□□□□ 0.71
COL9A3-204ENST00000463487 KIR2DS5A0A0G2JLQ3 304 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 A0A0G2JNG1 304 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 ZCWPW2A0A1B0GU75 182 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 C17orf113A0A1B0GUU1 675 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 PDZK1P1A8MUH7 402 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 KIR2DS3K7RE56 304 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 PRMT5O14744 637 aaPredicted RBP19.47■□□□□ 0.71
COL9A3-204ENST00000463487 RFPL3O75679 317 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 TRIM16O95361 564 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 GP1BAP07359 652 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 ARNTP27540 789 aa19.47■□□□□ 0.71
COL9A3-204ENST00000463487 DEKP35659 375 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms