RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 DMPKQ09013 629 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 SRSF6Q13247 344 aaKnown RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 MSLNQ13421 630 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 LINC00303Q3SY05 128 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 LDLRAP1Q5SW96 308 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 DCAF12Q5T6F0 453 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ZNF605Q86T29 641 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 PLXDC1Q8IUK5 500 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 CCDC50Q8IVM0 306 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 KLHDC8BQ8IXV7 354 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 DDHD1Q8NEL9 900 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 IPMKQ8NFU5 416 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ACTL9Q8TC94 416 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ART4Q93070 314 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 PMEPA1Q969W9 287 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ZPBPQ9BS86 351 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 TBC1D10AQ9BXI6 508 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 HEMGNQ9BXL5 484 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 OSBPL8Q9BZF1 889 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 SEMA4CQ9C0C4 833 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 RBSNQ9H1K0 784 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 GBA3Q9H227 469 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 BPIFA1Q9NP55 256 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 POT1Q9NUX5 634 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 SMOXQ9NWM0 555 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 OGFRQ9NZT2 677 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 EPHA6Q9UF33 1036 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 PILRAQ9UKJ1 303 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 REXO2Q9Y3B8 237 aaKnown RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 DUSP10Q9Y6W6 482 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 ZNF462Q96JM2 2506 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 MN1Q10571 1320 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-207ENST00000461798 COL6A6A6NMZ7 2263 aa9.01□□□□□ -0.97
BRCA1-207ENST00000461798 GLYATL1P3A0A0U1RQE8 302 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 C5orf60A6NFR6 353 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 SOWAHDA6NJG2 315 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 AGAP14A8MT82 685 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 B8ZZF3 427 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 H7C0C1 242 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 GAPDHSO14556 408 aaPredicted RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 CAPN5O15484 640 aaPredicted RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A9O60656 530 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 MTX2O75431 263 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 POP7O75817 140 aaKnown RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 AGTP01019 485 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 SLC4A1P02730 911 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 VCLP18206 1134 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A6P19224 532 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A1P22309 533 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A4P22310 534 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ATP5OP48047 213 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ATP1A2P50993 1020 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 GEMP55040 296 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 RWDD2BP57060 319 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 OTUD4Q01804 1114 aaKnown RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 ITGA9Q13797 1035 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 GTF2H3Q13889 308 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 LY6DQ14210 128 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 CHRNA6Q15825 494 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 INSCQ1MX18 579 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ANKRD20A2Q5SQ80 823 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ANKRD20A1Q5TYW2 823 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ANKRD20A3Q5VUR7 823 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ANKS6Q68DC2 871 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ITPRIPL1Q6GPH6 555 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 CRTC3Q6UUV7 619 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 CEACAM20Q6UY09 585 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 RAD9BQ6WBX8 426 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 GLT6D1Q7Z4J2 308 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 VASH2Q86V25 355 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 AMZ2Q86W34 360 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 CDKL3Q8IVW4 592 aaPredicted RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 SLC25A41Q8N5S1 370 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 RASGEF1AQ8N9B8 481 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 EXD3Q8N9H8 876 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 LRRC57Q8N9N7 239 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ZSCAN1Q8NBB4 408 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ZNF398Q8TD17 642 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 BLOC1S5Q8TDH9 187 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 HAUS1Q96CS2 278 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 RTP4Q96DX8 246 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ZNF514Q96K75 400 aaPredicted RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 C9orf72Q96LT7 481 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 PPP1R2P1Q96PQ5 205 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 FERMT1Q9BQL6 677 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 GORASP1Q9BQQ3 440 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 SLC12A9Q9BXP2 914 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ZCCHC2Q9C0B9 1178 aaKnown RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 LACRTQ9GZZ8 138 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 RAB33BQ9H082 229 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 OSGEPL1Q9H4B0 414 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A7Q9HAW7 530 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A10Q9HAW8 530 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 UGT1A8Q9HAW9 530 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 ARNT2Q9HBZ2 717 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 SLC40A1Q9NP59 571 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 SEMA5BQ9P283 1151 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 RSPH14Q9UHP6 348 aa9□□□□□ -0.97
BRCA1-207ENST00000461798 AAR2Q9Y312 384 aaKnown RBP9□□□□□ -0.97
BRCA1-207ENST00000461798 PKP3Q9Y446 797 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms