RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CDH6P55285 790 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 CDK18Q07002 472 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 ITKQ08881 620 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 INSCQ1MX18 579 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 MED25Q71SY5 747 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 PSTKQ8IV42 348 aaKnown RBP16.91■□□□□ 0.3
TOP3A-202ENST00000461127 CISD2Q8N5K1 135 aaKnown RBP16.91■□□□□ 0.3
TOP3A-202ENST00000461127 SMAD5Q99717 465 aaKnown RBP16.91■□□□□ 0.3
TOP3A-202ENST00000461127 RAB33BQ9H082 229 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 FAM83DQ9H4H8 585 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 SCHIP1Q9P0W5 487 aaPredicted RBP16.91■□□□□ 0.3
TOP3A-202ENST00000461127 C5AR2Q9P296 337 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 ZNF624Q9P2J8 865 aaPredicted RBP16.91■□□□□ 0.3
TOP3A-202ENST00000461127 SNX7Q9UNH6 387 aa16.91■□□□□ 0.3
TOP3A-202ENST00000461127 GPR89AB7ZAQ6 455 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 FZD6O60353 706 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 MAFKO60675 156 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 RNF8O76064 485 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 CLDN7O95471 211 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 GPR89BP0CG08 455 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 FOLR1P15328 257 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 OGDHQ02218 1023 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 LAMB3Q13751 1172 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 DPYSQ14117 519 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 TDRD12Q587J7 1177 aaKnown RBP16.9■□□□□ 0.3
TOP3A-202ENST00000461127 HENMT1Q5T8I9 393 aaKnown RBP16.9■□□□□ 0.3
TOP3A-202ENST00000461127 IZUMO3Q5VZ72 239 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 KLHL35Q6PF15 583 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 TMCO3Q6UWJ1 677 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 TMEM126BQ8IUX1 230 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 LRRC8AQ8IWT6 810 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 GLIS1Q8NBF1 620 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 ADAMTS17Q8TE56 1095 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 CXorf40BQ96DE9 158 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 SLC41A2Q96JW4 573 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 ZNF514Q96K75 400 aaPredicted RBP16.9■□□□□ 0.3
TOP3A-202ENST00000461127 SMIM14Q96QK8 99 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
TOP3A-202ENST00000461127 NT5MQ9NPB1 228 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 FGF21Q9NSA1 209 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 PKD2L2Q9NZM6 624 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 AIPL1Q9NZN9 384 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 CWC15Q9P013 229 aaKnown RBP16.9■□□□□ 0.3
TOP3A-202ENST00000461127 ATXN10Q9UBB4 475 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 B3GNT3Q9Y2A9 372 aa16.9■□□□□ 0.3
TOP3A-202ENST00000461127 SETD2Q9BYW2 2564 aaPredicted RBP16.89■□□□□ 0.3
TOP3A-202ENST00000461127 IGHV5-51A0A0C4DH38 117 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 FADS2P1A8MWK0 482 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 H3BRJ5 948 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 SCRG1O75711 98 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 SERPING1P05155 500 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 PRF1P14222 555 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 ZNF8P17098 575 aaPredicted RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 CA4P22748 312 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 ARL4AP40617 200 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 SPINT3P49223 89 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 VAV2P52735 878 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 KLHL30Q0D2K2 578 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 GPR18Q14330 331 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 KCNAB1Q14722 419 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 SEPT7Q16181 437 aaKnown RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 PLEKHN1Q494U1 663 aaPredicted RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 LYPLAL1Q5VWZ2 237 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 TMTC1Q8IUR5 882 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 ARFGAP1Q8N6T3 406 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 CCHCR1Q8TD31 782 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 PEBP4Q96S96 227 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 POLR1EQ9GZS1 481 aaKnown RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 OR2AG1Q9H205 316 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.29
TOP3A-202ENST00000461127 COPG1Q9Y678 874 aaKnown RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 BZW2Q9Y6E2 419 aaKnown RBP16.89■□□□□ 0.29
TOP3A-202ENST00000461127 ITPR3Q14573 2671 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 C1orf232A0A0U1RR37 186 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 RGSL1A5PLK6 1076 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 SLC25A14O95258 325 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-202ENST00000461127 JCHAINP01591 159 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 RAB40ALP0C0E4 278 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 EBLN1P0CF75 366 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 SKILP12757 684 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 VWA5B1Q5TIE3 1220 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 E4F1Q66K89 784 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-202ENST00000461127 CRTC3Q6UUV7 619 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 ZC3H18Q86VM9 953 aaKnown RBP16.88■□□□□ 0.29
TOP3A-202ENST00000461127 KMT5CQ86Y97 462 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 MCOLN2Q8IZK6 566 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 OR8K5Q8NH50 307 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 SGSM3Q96HU1 749 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 WDR24Q96S15 920 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 ILKAPQ9H0C8 392 aaPredicted RBP16.88■□□□□ 0.29
TOP3A-202ENST00000461127 CHST8Q9H2A9 424 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 PARVAQ9NVD7 372 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 HAUS2Q9NVX0 235 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 DNAJC16Q9Y2G8 782 aa16.88■□□□□ 0.29
TOP3A-202ENST00000461127 KMOO15229 486 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 KLHL41O60662 606 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ALPPP05187 535 aa16.87■□□□□ 0.29
TOP3A-202ENST00000461127 ZNF7P17097 686 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms