RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TTC25Q96NG3 672 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 FSD1LQ9BXM9 530 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 SPRY4Q9C004 299 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 IL17CQ9P0M4 197 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 RSPH14Q9UHP6 348 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 TMEM184BQ9Y519 407 aaPredicted RBP22.4■■□□□ 1.18
PTPN4-207ENST00000460162 PCDHA13Q9Y5I0 950 aa22.4■■□□□ 1.18
PTPN4-207ENST00000460162 GLYATL1P3A0A0U1RQE8 302 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 SLC28A2O43868 658 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 KCNJ13O60928 360 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 PPFIA2O75334 1257 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 BRAFP15056 766 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 MAP4P27816 1152 aaKnown RBP22.39■■□□□ 1.17
PTPN4-207ENST00000460162 CYLC1P35663 651 aaPredicted RBP22.39■■□□□ 1.17
PTPN4-207ENST00000460162 CAPZBP47756 277 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 NFATC3Q12968 1075 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 ITGA9Q13797 1035 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 LDLRAP1Q5SW96 308 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 DAAM2Q86T65 1068 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 SLC25A41Q8N5S1 370 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 DDHD1Q8NEL9 900 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 BLOC1S5Q8TDH9 187 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 KRT35Q92764 455 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 KIAA1143Q96AT1 154 aaPredicted RBP22.39■■□□□ 1.17
PTPN4-207ENST00000460162 CTRCQ99895 268 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 STARD5Q9NSY2 213 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 SMOXQ9NWM0 555 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 PKP3Q9Y446 797 aa22.39■■□□□ 1.17
PTPN4-207ENST00000460162 ZNF891A8MT65 544 aaPredicted RBP22.38■■□□□ 1.17
PTPN4-207ENST00000460162 F5H423 210 aaPredicted RBP22.38■■□□□ 1.17
PTPN4-207ENST00000460162 STK17BO94768 372 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 RPL10P27635 214 aaKnown RBP22.38■■□□□ 1.17
PTPN4-207ENST00000460162 HALP42357 657 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 COPS2P61201 443 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 DMPKQ09013 629 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 FAM151BQ6UXP7 276 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 CXorf40BQ96DE9 158 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 SLC45A3Q96JT2 553 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 CALR3Q96L12 384 aaKnown RBP22.38■■□□□ 1.17
PTPN4-207ENST00000460162 FERMT1Q9BQL6 677 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 EFHD1Q9BUP0 239 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 FAM117AQ9C073 453 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 GBA3Q9H227 469 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 TRIT1Q9H3H1 467 aaKnown RBP22.38■■□□□ 1.17
PTPN4-207ENST00000460162 APMAPQ9HDC9 416 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 SLC40A1Q9NP59 571 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 HEMK1Q9Y5R4 338 aaPredicted RBP22.38■■□□□ 1.17
PTPN4-207ENST00000460162 SLC30A1Q9Y6M5 507 aa22.38■■□□□ 1.17
PTPN4-207ENST00000460162 OR52A4PA6NMU1 304 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 POLR1CO15160 346 aaPredicted RBP22.37■■□□□ 1.17
PTPN4-207ENST00000460162 DLGAP3O95886 979 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 TYRP1P17643 537 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 AMD1P17707 334 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 ITGB6P18564 788 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 CTNNA1P35221 906 aaKnown RBP22.37■■□□□ 1.17
PTPN4-207ENST00000460162 DRG2P55039 364 aaKnown RBP22.37■■□□□ 1.17
PTPN4-207ENST00000460162 ABHD18Q0P651 414 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 MAP7Q14244 749 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 GPR18Q14330 331 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 ITPRIPL1Q6GPH6 555 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 BORAQ6PGQ7 559 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 TGM7Q96PF1 710 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 ADNPQ9H2P0 1102 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 ZNF768Q9H5H4 540 aaKnown RBP22.37■■□□□ 1.17
PTPN4-207ENST00000460162 GPN2Q9H9Y4 310 aaPredicted RBP22.37■■□□□ 1.17
PTPN4-207ENST00000460162 TFR2Q9UP52 801 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 BSNQ9UPA5 3926 aa22.37■■□□□ 1.17
PTPN4-207ENST00000460162 SETXQ7Z333 2677 aaKnown RBP22.37■■□□□ 1.17
PTPN4-207ENST00000460162 ANXA9O76027 345 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 ZIC2O95409 532 aaPredicted RBP22.36■■□□□ 1.17
PTPN4-207ENST00000460162 GEMP55040 296 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 CHRNA6Q15825 494 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 PRICKLE2Q7Z3G6 844 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 PRSS42Q7Z5A4 293 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 AMZ2Q86W34 360 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 RSC1A1Q92681 617 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 CATSPER2Q96P56 530 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 HEMGNQ9BXL5 484 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 GEMIN8Q9NWZ8 242 aaKnown RBP22.36■■□□□ 1.17
PTPN4-207ENST00000460162 EFR3BQ9Y2G0 817 aa22.36■■□□□ 1.17
PTPN4-207ENST00000460162 FLNBO75369 2602 aaKnown RBP22.35■■□□□ 1.17
PTPN4-207ENST00000460162 H7C0C1 242 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 GAPDHSO14556 408 aaPredicted RBP22.35■■□□□ 1.17
PTPN4-207ENST00000460162 GPR39O43194 453 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 RBL1P28749 1068 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 PTPN7P35236 360 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 ATP5OP48047 213 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 GPRC6AQ5T6X5 926 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 CCDC181Q5TID7 509 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 TIPARPQ7Z3E1 657 aaKnown RBP22.35■■□□□ 1.17
PTPN4-207ENST00000460162 ESX1Q8N693 406 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 RASGEF1AQ8N9B8 481 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 RAB33BQ9H082 229 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 WDR37Q9Y2I8 494 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 DNMT3AQ9Y6K1 912 aaPredicted RBP22.35■■□□□ 1.17
PTPN4-207ENST00000460162 MYO18BQ8IUG5 2567 aa22.35■■□□□ 1.17
PTPN4-207ENST00000460162 PJA2O43164 708 aa22.34■■□□□ 1.17
PTPN4-207ENST00000460162 IPO7O95373 1038 aaKnown RBP22.34■■□□□ 1.17
PTPN4-207ENST00000460162 LEPRP48357 1165 aaKnown RBP22.34■■□□□ 1.17
PTPN4-207ENST00000460162 CTSCP53634 463 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms