RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 HERVK_113P63132 956 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 TTLL9Q3SXZ7 439 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 DNAL1Q4LDG9 190 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 CTSL3PQ5NE16 218 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 C6orf10Q5SRN2 563 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 AP1ARQ63HQ0 302 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 TMEM215Q68D42 235 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 RAET1GQ6H3X3 334 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 PAOXQ6QHF9 649 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 ZNF783Q6ZMS7 281 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 FAM124AQ86V42 546 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 LMNTD1Q8N9Z9 388 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 FNDC5Q8NAU1 212 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 OR52B6Q8NGF0 335 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 OR2A12Q8NGT7 310 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 TWIST2Q8WVJ9 160 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 HERVK_113Q902F9 699 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 UBXN10Q96LJ8 280 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 ERVK-6Q9BXR3 956 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 MRPL1Q9BYD6 325 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 ACTR8Q9H981 624 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 PFDN4Q9NQP4 134 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 PKD2L2Q9NZM6 624 aa9.25□□□□□ -0.93
NUDCD3-203ENST00000460110 PSMD12O00232 456 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 MOSPD3O75425 235 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CDK14O94921 469 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 EFEMP2O95967 443 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CYP17A1P05093 508 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 LHCGRP22888 699 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 SKIV2L2P42285 1042 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CCNG1P51959 295 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 SLC44A4Q53GD3 710 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ZNF678Q5SXM1 525 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 TANGO2Q6ICL3 276 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 DNAJC14Q6Y2X3 702 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 MILR1Q7Z6M3 343 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CLYBLQ8N0X4 340 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CPXM2Q8N436 756 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 PPFIBP2Q8ND30 876 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 FOXJ1Q92949 421 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 C19orf60Q96EN9 201 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 FAM126AQ9BYI3 521 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 THG1LQ9NWX6 298 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 DNAJC28Q9NX36 388 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CLDND1Q9NY35 253 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 NOP53Q9NZM5 478 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 VTI1BQ9UEU0 232 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 A0A1B0GTL3 188 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 RAD51BO15315 384 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 LINC01565O15544 149 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 MMP20O60882 483 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 STAMBPO95630 424 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 OR56A5P0C7T3 313 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 DGKAP23743 735 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ATP6V0D1P61421 351 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 TAF11Q15544 211 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 TGFBIQ15582 683 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 GPRC6AQ5T6X5 926 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ERAP2Q6P179 960 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ISLR2Q6UXK2 745 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CYP2R1Q6VVX0 501 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ASRGL1Q7L266 308 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 TMEM151AQ8N4L1 468 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ZBTB2Q8N680 514 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 KYQ8NBH2 561 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 FLCNQ8NFG4 579 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CD200R1Q8TD46 325 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 NXPE3Q969Y0 559 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 BIRC8Q96P09 236 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 TRIM54Q9BYV2 358 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 STK39Q9UEW8 545 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 COPG1Q9Y678 874 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 FNDC1Q4ZHG4 1894 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 RGSL1A5PLK6 1076 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 SLCO1B7G3V0H7 640 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 SYNCRIPO60506 623 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 LATS1O95835 1130 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 MAT2AP31153 395 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 PREPP48147 710 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 POLD2P49005 469 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 FOXD4Q12950 439 aaPredicted RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 GRAMD1BQ3KR37 738 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CES5AQ6NT32 575 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 TRMT11Q7Z4G4 463 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 HSD11B1LQ7Z5J1 315 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 AHI1Q8N157 1196 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 NXPE1Q8N323 547 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CLHC1Q8NHS4 586 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 FUBP1Q96AE4 644 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 RSPRY1Q96DX4 576 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 PTCD3Q96EY7 689 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 SCRN2Q96FV2 425 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 CCDC106Q9BWC9 280 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 IPPKQ9H8X2 491 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 LMCD1Q9NZU5 365 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 ASB1Q9Y576 335 aa9.24□□□□□ -0.93
NUDCD3-203ENST00000460110 NLRC5Q86WI3 1866 aa9.23□□□□□ -0.93
NUDCD3-203ENST00000460110 CAPN8A6NHC0 703 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms