RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 SRP72O76094 671 aaKnown RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 PRAMEF1O95521 474 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 CRTAMO95727 393 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 BRAFP15056 766 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 SLC19A1P41440 591 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 ZNF140P52738 457 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 CTSCP53634 463 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 PDE1BQ01064 536 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 DMPKQ09013 629 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 CLN3Q13286 438 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 OASLQ15646 514 aaKnown RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 AGAP9Q5VTM2 703 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 WDR74Q6RFH5 385 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 SLC13A5Q86YT5 568 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 TRAPPC5Q8IUR0 188 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 OR13C4Q8NGS5 318 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 ATG4AQ8WYN0 398 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 AHCYL2Q96HN2 611 aaKnown RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 TTC25Q96NG3 672 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 B3GNT4Q9C0J1 378 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 UCK1Q9HA47 277 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 FKBPLQ9UIM3 349 aa16.22■□□□□ 0.19
SHANK2-213ENST00000460048 DNMT3AQ9Y6K1 912 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-213ENST00000460048 PRAMEF33A0A0G2JMD5 474 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 LDB2O43679 373 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 LIASO43766 372 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 PRAMEF10O60809 474 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 CCDC175P0C221 793 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 CCL4P13236 92 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 IDSP22304 550 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 UCNP55089 124 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 CCZ1BP86790 482 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 CCZ1P86791 482 aaPredicted RBP16.21■□□□□ 0.19
SHANK2-213ENST00000460048 P3H1Q32P28 736 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 BROXQ5VW32 411 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 TMEM220Q6QAJ8 160 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 JAMLQ86YT9 394 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 USP7Q93009 1102 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 LRRC45Q96CN5 670 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 FCRL3Q96P31 734 aaPredicted RBP16.21■□□□□ 0.19
SHANK2-213ENST00000460048 TBC1D10AQ9BXI6 508 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 FRMD8P1Q9BZ68 369 aaPredicted RBP16.21■□□□□ 0.19
SHANK2-213ENST00000460048 EPB41L1Q9H4G0 881 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 ASB8Q9H765 288 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 LRRC40Q9H9A6 602 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 AKAP7Q9P0M2 348 aaPredicted RBP16.21■□□□□ 0.19
SHANK2-213ENST00000460048 CACNA1GO43497 2377 aa16.21■□□□□ 0.19
SHANK2-213ENST00000460048 AHCTF1Q8WYP5 2266 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 PDZK1P1A8MUH7 402 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 C9orf172C9J069 976 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 PSMD3O43242 534 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 POP7O75817 140 aaKnown RBP16.2■□□□□ 0.18
SHANK2-213ENST00000460048 AP2A1O95782 977 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 FGF3P11487 239 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-213ENST00000460048 VCLP18206 1134 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 MPSTP25325 297 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 RPL10P27635 214 aaKnown RBP16.2■□□□□ 0.18
SHANK2-213ENST00000460048 STIP1P31948 543 aaKnown RBP16.2■□□□□ 0.18
SHANK2-213ENST00000460048 MAPK10P53779 464 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 TMPRSS3P57727 454 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 RPS6KA1Q15418 735 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 SEPT7Q16181 437 aaKnown RBP16.2■□□□□ 0.18
SHANK2-213ENST00000460048 SOWAHCQ53LP3 525 aaPredicted RBP16.2■□□□□ 0.18
SHANK2-213ENST00000460048 TMEM26Q6ZUK4 368 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 GPR155Q7Z3F1 870 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 ARHGAP22Q7Z5H3 698 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 AMZ2Q86W34 360 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 AGBL5Q8NDL9 886 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 LZTFL1Q9NQ48 299 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 POT1Q9NUX5 634 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 FOXJ2Q9P0K8 574 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 WDR37Q9Y2I8 494 aa16.2■□□□□ 0.18
SHANK2-213ENST00000460048 IGSF10Q6WRI0 2623 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 OR2AG2A6NM03 316 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 H7C0S8 307 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 VIPP01282 170 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 MSH3P20585 1137 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 HADHAP40939 763 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 DRG2P55039 364 aaKnown RBP16.19■□□□□ 0.18
SHANK2-213ENST00000460048 CXADRP78310 365 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 CLCA4Q14CN2 919 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 SIX1Q15475 284 aaPredicted RBP16.19■□□□□ 0.18
SHANK2-213ENST00000460048 SNRNP27Q8WVK2 155 aaKnown RBP16.19■□□□□ 0.18
SHANK2-213ENST00000460048 NCSTNQ92542 709 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 ZNF514Q96K75 400 aaPredicted RBP16.19■□□□□ 0.18
SHANK2-213ENST00000460048 BBC3Q96PG8 261 aaPredicted RBP16.19■□□□□ 0.18
SHANK2-213ENST00000460048 CPNE5Q9HCH3 593 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 OGFRQ9NZT2 677 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 SLC30A1Q9Y6M5 507 aa16.19■□□□□ 0.18
SHANK2-213ENST00000460048 OR52A4PA6NMU1 304 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 SGTAO43765 313 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 LIPCP11150 499 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 TPH1P17752 444 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 PSMA3P25788 255 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 CD82P27701 267 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 AKT1P31749 480 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 CSTF2P33240 577 aaKnown RBP eCLIP16.18■□□□□ 0.18
SHANK2-213ENST00000460048 ARSDP51689 593 aa16.18■□□□□ 0.18
SHANK2-213ENST00000460048 TMPRSS15P98073 1019 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms