RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ACSL6Q9UKU0 697 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 DNAJC16Q9Y2G8 782 aa15.87■□□□□ 0.13
COL7A1-203ENST00000459756 DNMT3AQ9Y6K1 912 aaPredicted RBP15.87■□□□□ 0.13
COL7A1-203ENST00000459756 IGSF10Q6WRI0 2623 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 PDZK1P1A8MUH7 402 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 NVLO15381 856 aaKnown RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 GPR39O43194 453 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 KLK10O43240 276 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 PSMD3O43242 534 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 NRDCO43847 1150 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 SRP72O76094 671 aaKnown RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 METTL18O95568 372 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 THRAP10827 490 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 ITIH1P19827 911 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 IDSP22304 550 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 STIP1P31948 543 aaKnown RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 HADHAP40939 763 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 PPM1FP49593 454 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 GDF10P55107 478 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 CFHR1Q03591 330 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 MEI1Q5TIA1 1274 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 ABRAXAS1Q6UWZ7 409 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 C11orf96Q7Z7L8 435 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 AMZ2Q86W34 360 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 SLC13A5Q86YT5 568 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 ATG4AQ8WYN0 398 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF514Q96K75 400 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 FCRL3Q96P31 734 aaPredicted RBP15.86■□□□□ 0.13
COL7A1-203ENST00000459756 B3GNT4Q9C0J1 378 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 LZTFL1Q9NQ48 299 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 PDP2Q9P2J9 529 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 FKBPLQ9UIM3 349 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 KCTD3Q9Y597 815 aa15.86■□□□□ 0.13
COL7A1-203ENST00000459756 LILRA5A6NI73 299 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 LIASO43766 372 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 AP2A1O95782 977 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 VIPP01282 170 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 MSH3P20585 1137 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 AKT1P31749 480 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF140P52738 457 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-203ENST00000459756 TMPRSS3P57727 454 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 DMPKQ09013 629 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 OASLQ15646 514 aaKnown RBP15.85■□□□□ 0.13
COL7A1-203ENST00000459756 SEPT7Q16181 437 aaKnown RBP15.85■□□□□ 0.13
COL7A1-203ENST00000459756 LONRF2Q1L5Z9 754 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 TMEM164Q5U3C3 297 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 TRIM48Q8IWZ4 208 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 AGBL5Q8NDL9 886 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 RCBTB1Q8NDN9 531 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 ASB8Q9H765 288 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 SCHIP1Q9P0W5 487 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-203ENST00000459756 ZNF624Q9P2J8 865 aaPredicted RBP15.85■□□□□ 0.13
COL7A1-203ENST00000459756 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
COL7A1-203ENST00000459756 ERI2A8K979 691 aaKnown RBP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 AGAP14A8MT82 685 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 AGRPO00253 132 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 LDB2O43679 373 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 POP7O75817 140 aaKnown RBP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 BRAFP15056 766 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 MPSTP25325 297 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 RPL10P27635 214 aaKnown RBP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 CSTF2P33240 577 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 CA5AP35218 305 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 ETV5P41161 510 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 HALP42357 657 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 CTSCP53634 463 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 CCZ1BP86790 482 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 CCZ1P86791 482 aaPredicted RBP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 XIAPP98170 497 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 TMEM220Q6QAJ8 160 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 TMEM26Q6ZUK4 368 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 LINC00523Q86TU6 105 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 RBM12BQ8IXT5 1001 aaKnown RBP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 OR13C4Q8NGS5 318 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 USP7Q93009 1102 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 ULK4Q96C45 1275 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 POT1Q9NUX5 634 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.84■□□□□ 0.13
COL7A1-203ENST00000459756 TMEM9Q9P0T7 183 aa15.84■□□□□ 0.13
COL7A1-203ENST00000459756 CACNA1GO43497 2377 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 PRAMEF33A0A0G2JMD5 474 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 KLHL33A6NCF5 533 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 OR2AG2A6NM03 316 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 PRAMEF10O60809 474 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 RALBP11234 206 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 CCL4P13236 92 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 ITGALP20701 1170 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 SLC19A1P41440 591 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 MAPK9P45984 424 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 MAPK10P53779 464 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 DRG2P55039 364 aaKnown RBP15.83■□□□□ 0.12
COL7A1-203ENST00000459756 CXADRP78310 365 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 CLN3Q13286 438 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 GPR33Q49SQ1 333 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 FNBP1LQ5T0N5 605 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 GPR155Q7Z3F1 870 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 TRIM58Q8NG06 486 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 NCSTNQ92542 709 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 CXorf40BQ96DE9 158 aa15.83■□□□□ 0.12
COL7A1-203ENST00000459756 DCUN1D1Q96GG9 259 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms