RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 RNASEH2AO75792 299 aaKnown RBP24.1■■□□□ 1.45
U2AF1-204ENST00000459639 IPO13O94829 963 aaKnown RBP24.1■■□□□ 1.45
U2AF1-204ENST00000459639 SOD1P00441 154 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 IL9P15248 144 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 ITGB6P18564 788 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 DGKAP23743 735 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 ZBTB16Q05516 673 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 SF3A3Q12874 501 aaKnown RBP eCLIP24.1■■□□□ 1.45
U2AF1-204ENST00000459639 TMPRSS6Q8IU80 811 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 RPLP0P6Q8NHW5 317 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 PPP4R1Q8TF05 950 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 PLCD4Q9BRC7 762 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 ZNF395Q9H8N7 513 aaPredicted RBP24.1■■□□□ 1.45
U2AF1-204ENST00000459639 DUSP12Q9UNI6 340 aa24.1■■□□□ 1.45
U2AF1-204ENST00000459639 BTN3A1O00481 513 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 MAN2B1O00754 1011 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 LYPLA1O75608 230 aaPredicted RBP24.09■■□□□ 1.45
U2AF1-204ENST00000459639 TPBGLP0DKB5 382 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 KCNC1P48547 511 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 SORT1Q99523 831 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 DRC3Q9H069 523 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 FBXL12Q9NXK8 326 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 IKZF3Q9UKT9 509 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 RNF112Q9ULX5 631 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 TRPM6Q9BX84 2022 aa24.09■■□□□ 1.45
U2AF1-204ENST00000459639 NPEPPSL1A6NEC2 478 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 NEMP2A6NFY4 417 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 SYCE1LA8MT33 242 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 EIF3FO00303 357 aaPredicted RBP24.08■■□□□ 1.45
U2AF1-204ENST00000459639 TM7SF2O76062 418 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 CBSLP0DN79 551 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 CBSP35520 551 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 GPR1P46091 355 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 NAGLUP54802 743 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 RCN2Q14257 317 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 AGERQ15109 404 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 TSNQ15631 228 aaKnown RBP24.08■■□□□ 1.45
U2AF1-204ENST00000459639 MLF2Q15773 248 aaPredicted RBP24.08■■□□□ 1.45
U2AF1-204ENST00000459639 TTC31Q49AM3 519 aaPredicted RBP24.08■■□□□ 1.45
U2AF1-204ENST00000459639 KHDC1Q4VXA5 237 aaKnown RBP24.08■■□□□ 1.45
U2AF1-204ENST00000459639 RAET1GQ6H3X3 334 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 PIWIL4Q7Z3Z4 852 aaKnown RBP24.08■■□□□ 1.45
U2AF1-204ENST00000459639 C10orf82Q8WW14 230 aa24.08■■□□□ 1.45
U2AF1-204ENST00000459639 CDC7O00311 574 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 PLRG1O43660 514 aaKnown RBP24.08■■□□□ 1.44
U2AF1-204ENST00000459639 NPHS1O60500 1241 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 MTX2O75431 263 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 PCDH8O95206 1070 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 HSPA4LO95757 839 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 ARRB2P32121 409 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 SERPINB5P36952 375 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 DET1Q7L5Y6 550 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 MYO1HQ8N1T3 1032 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 THOC1Q96FV9 657 aaKnown RBP24.08■■□□□ 1.44
U2AF1-204ENST00000459639 NCKIPSDQ9NZQ3 722 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 CNOT6Q9ULM6 557 aaKnown RBP24.08■■□□□ 1.44
U2AF1-204ENST00000459639 MMP17Q9ULZ9 603 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 TMCO1Q9UM00 188 aa24.08■■□□□ 1.44
U2AF1-204ENST00000459639 SNUPNO95149 360 aaKnown RBP24.07■■□□□ 1.44
U2AF1-204ENST00000459639 FTH1P02794 183 aa24.07■■□□□ 1.44
U2AF1-204ENST00000459639 TRIM67Q6ZTA4 783 aa24.07■■□□□ 1.44
U2AF1-204ENST00000459639 PELI3Q8N2H9 469 aa24.07■■□□□ 1.44
U2AF1-204ENST00000459639 GANCQ8TET4 914 aa24.07■■□□□ 1.44
U2AF1-204ENST00000459639 FUBP1Q96AE4 644 aaKnown RBP24.07■■□□□ 1.44
U2AF1-204ENST00000459639 L3HYPDHQ96EM0 354 aa24.07■■□□□ 1.44
U2AF1-204ENST00000459639 ZCCHC2Q9C0B9 1178 aaKnown RBP24.07■■□□□ 1.44
U2AF1-204ENST00000459639 FZD4Q9ULV1 537 aa24.07■■□□□ 1.44
U2AF1-204ENST00000459639 IGLON5A6NGN9 336 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 UBXN8O00124 270 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 KPNA5O15131 536 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 INPP4BO15327 924 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 SGTAO43765 313 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 ENO3P13929 434 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-204ENST00000459639 MTHFD2P13995 350 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 AOAHP28039 575 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 SFSWAPQ12872 951 aaKnown RBP24.06■■□□□ 1.44
U2AF1-204ENST00000459639 ACSBG2Q5FVE4 666 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 C6orf89Q6UWU4 347 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 USP30Q70CQ3 517 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 ADAMTSL2Q86TH1 951 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 RFWD2Q8NHY2 731 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 PIWIL2Q8TC59 973 aaKnown RBP24.06■■□□□ 1.44
U2AF1-204ENST00000459639 EXT2Q93063 718 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 SIPA1Q96FS4 1042 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 TMEM237Q96Q45 408 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 SIKE1Q9BRV8 207 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 SLC6A17Q9H1V8 727 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 CYP4F12Q9HCS2 524 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 MBD1Q9UIS9 605 aaPredicted RBP24.06■■□□□ 1.44
U2AF1-204ENST00000459639 DNAJC16Q9Y2G8 782 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 USH1CQ9Y6N9 552 aa24.06■■□□□ 1.44
U2AF1-204ENST00000459639 K7ESM1 405 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 CCR7P32248 378 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 TMEM115Q12893 351 aaPredicted RBP24.05■■□□□ 1.44
U2AF1-204ENST00000459639 GBX1Q14549 363 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 KIAA1161Q6NSJ0 714 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 ATG14Q6ZNE5 492 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 KBTBD6Q86V97 674 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 RASGEF1AQ8N9B8 481 aa24.05■■□□□ 1.44
U2AF1-204ENST00000459639 CNDP1Q96KN2 507 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms