RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 UGT1A9O60656 530 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 METTL18O95568 372 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 VIPP01282 170 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 IFNB1P01574 187 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 XRCC1P18887 633 aaPredicted RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A6P19224 532 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A1P22309 533 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A4P22310 534 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A3P35503 534 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 CCZ1BP86790 482 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 CCZ1P86791 482 aaPredicted RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 NFATC2Q13469 925 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 SPARCL1Q14515 664 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 AGAP9Q5VTM2 703 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 KCTD11Q693B1 232 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 C4orf22Q6V702 233 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 WASH2PQ6VEQ5 465 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 RBM12BQ8IXT5 1001 aaKnown RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 ATG4AQ8WYN0 398 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 NAF1Q96HR8 494 aaKnown RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 FCRL3Q96P31 734 aaPredicted RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UCK1Q9HA47 277 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A7Q9HAW7 530 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A10Q9HAW8 530 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 UGT1A8Q9HAW9 530 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 WASH6PQ9NQA3 447 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 PRDM8Q9NQV8 689 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 FKBPLQ9UIM3 349 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 CRLS1Q9UJA2 301 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 PCYT1BQ9Y5K3 369 aaPredicted RBP17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 SLC30A1Q9Y6M5 507 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 LOC400499M0QZD8 3231 aa17.25■□□□□ 0.35
SCARNA2-201ENST00000458748 MSNP26038 577 aaKnown RBP17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 CSTF2P33240 577 aaKnown RBP eCLIP17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 LIMK2P53671 638 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 GDF10P55107 478 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 OASLQ15646 514 aaKnown RBP17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 CCNG2Q16589 344 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 GPR33Q49SQ1 333 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 DENND5AQ6IQ26 1287 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 TMEM71Q6P5X7 295 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 TMEM220Q6QAJ8 160 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 WDR74Q6RFH5 385 aaPredicted RBP17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 ABRAXAS1Q6UWZ7 409 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 SNX20Q7Z614 316 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 JAMLQ86YT9 394 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 ZNF547Q8IVP9 402 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 BEND7Q8N7W2 519 aaPredicted RBP17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 CXorf40BQ96DE9 158 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 UBL7Q96S82 380 aaPredicted RBP17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 NUDT22Q9BRQ3 303 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 B3GNT4Q9C0J1 378 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 SEMA6CQ9H3T2 930 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 PAK5Q9P286 719 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 PISDQ9UG56 409 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 ACSL6Q9UKU0 697 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 TMPRSS11EQ9UL52 423 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
SCARNA2-201ENST00000458748 IGHV5-10-1A0A0J9YXX1 117 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 PMS2P1A4D2B8 440 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 LILRA5A6NI73 299 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 NVLO15381 856 aaKnown RBP17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 EML2O95834 649 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 ZNF140P52738 457 aaPredicted RBP17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 TMPRSS3P57727 454 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 DMPKQ09013 629 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 CDH17Q12864 832 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 OLIG2Q13516 323 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 SEPT6Q14141 434 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 SEPT7Q16181 437 aaKnown RBP17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 SKIDA1Q1XH10 827 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 KHDC1Q4VXA5 237 aaKnown RBP17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 NKAIN2Q5VXU1 208 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 DRICH1Q6PGQ1 229 aaPredicted RBP17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 PPP1R21Q6ZMI0 780 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 TMPRSS9Q7Z410 1059 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 RASGEF1AQ8N9B8 481 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 AGBL5Q8NDL9 886 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 STYXQ8WUJ0 223 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 C1orf54Q8WWF1 131 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 CCDC74BQ96LY2 380 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 COPS8Q99627 209 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 POT1Q9NUX5 634 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 SLC23A2Q9UGH3 650 aa17.23■□□□□ 0.35
SCARNA2-201ENST00000458748 OR2AG2A6NM03 316 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 AP3B1O00203 1094 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 GAPDHSO14556 408 aaPredicted RBP17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 KLK10O43240 276 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 ZSCAN12O43309 604 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 POP7O75817 140 aaKnown RBP17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 FGGP02679 453 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 PRB1P04280 392 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 SLC5A2P31639 672 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 MAPK9P45984 424 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 UBE2IP63279 158 aaKnown RBP17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 TMPRSS15P98073 1019 aa17.22■□□□□ 0.35
SCARNA2-201ENST00000458748 SNX1Q13596 522 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms