RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 RTP4Q96DX8 246 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 DGAT2Q96PD7 388 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 TM6SF1Q9BZW5 370 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 HIPK2Q9H2X6 1198 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 PSD3Q9NYI0 1048 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 LARSQ9P2J5 1176 aaKnown RBP3.88□□□□□ -1.79
VPS8-211ENST00000452140 MORF4L1Q9UBU8 362 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 VDAC3Q9Y277 283 aa3.88□□□□□ -1.79
VPS8-211ENST00000452140 TMEM184BQ9Y519 407 aaPredicted RBP3.88□□□□□ -1.79
VPS8-211ENST00000452140 INSIG1O15503 277 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 CREG1O75629 220 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 WISP2O76076 250 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 PPP1R3DO95685 299 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 ABCB1P08183 1280 aaPredicted RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 VPREB1P12018 145 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 POLR2CP19387 275 aaPredicted RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 ARSEP51690 589 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 SEC61A1P61619 476 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 KIF5AQ12840 1032 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 ZBTB17Q13105 803 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 BAATQ14032 418 aaPredicted RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 IL11RAQ14626 422 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 C15orf59Q2T9L4 293 aaPredicted RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 STXBP5Q5T5C0 1151 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 RPUSD3Q6P087 351 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.87□□□□□ -1.79
VPS8-211ENST00000452140 INTS8Q75QN2 995 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 ZNF534Q76KX8 674 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 ARMC9Q7Z3E5 817 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 ADIPOR2Q86V24 386 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 POGLUT1Q8NBL1 392 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 RBM15BQ8NDT2 890 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 THAP6Q8TBB0 222 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 WDR20Q8TBZ3 569 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 MAGEC3Q8TD91 643 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 NUDCD2Q8WVJ2 157 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 SNRNP27Q8WVK2 155 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 DNAAF4Q8WXU2 420 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 FIG4Q92562 907 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 SECISBP2LQ93073 1101 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 CCDC106Q9BWC9 280 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 SPATC1LQ9H0A9 340 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 LRMDAQ9H2I8 198 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 KCNK15Q9H427 330 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 GOLPH3LQ9H4A5 285 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 MBNL1Q9NR56 388 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 TMEM30AQ9NV96 361 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 TRMT1Q9NXH9 659 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 MARCH4Q9P2E8 410 aaPredicted RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 RALYQ9UKM9 306 aaKnown RBP3.87□□□□□ -1.79
VPS8-211ENST00000452140 ZNF711Q9Y462 761 aa3.87□□□□□ -1.79
VPS8-211ENST00000452140 LOC100509620A0A075B734 347 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 PLSCR5A0PG75 271 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 OR5K3A6NET4 321 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 C4orf47A7E2U8 309 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 MAGEB17A8MXT2 336 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 UBE2CO00762 179 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 NDUFS4O43181 175 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 DIAPH2O60879 1101 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 LDB3O75112 727 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 CAMTA2O94983 1202 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 T-ENOLP0DO92 83 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 CAPZA2P47755 286 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 CDH13P55290 713 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 FOXG1P55316 489 aaPredicted RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 SNRPEP62304 92 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 ZXDBP98169 803 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 PLIN5Q00G26 463 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 AIMP1Q12904 312 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 ZNF234Q14588 700 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 IZUMO4Q1ZYL8 232 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 TMEM35AQ53FP2 167 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 ERMARDQ5T6L9 678 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 C9orf57Q5W0N0 161 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 OR7E24Q6IFN5 339 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 FAM122CQ6P4D5 195 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 Q75L30 129 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 C16orf82Q7Z2V1 217 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 SFR1Q86XK3 245 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 CEP57Q86XR8 500 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 SAMD14Q8IZD0 417 aaPredicted RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 GUF1Q8N442 669 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 GCSAMQ8N6F7 178 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 C1orf52Q8N6N3 182 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 RBMXL3Q8N7X1 1067 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 POMGNT2Q8NAT1 580 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 PPP4R1Q8TF05 950 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 BICD1Q96G01 975 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 OXNAD1Q96HP4 312 aaPredicted RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 THOC3Q96J01 351 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 LYZL4Q96KX0 146 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 ZNF582Q96NG8 517 aaPredicted RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 DACH2Q96NX9 599 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 SLC35C2Q9NQQ7 365 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 RCC2Q9P258 522 aaKnown RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 CRNNQ9UBG3 495 aaPredicted RBP3.86□□□□□ -1.79
VPS8-211ENST00000452140 AMACRQ9UHK6 382 aa3.86□□□□□ -1.79
VPS8-211ENST00000452140 ZNF644Q9H582 1327 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms