RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 STRADBQ9C0K7 418 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 ASB8Q9H765 288 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 UCK1Q9HA47 277 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 THSD1Q9NS62 852 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 KCNK4Q9NYG8 393 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 TMEM9Q9P0T7 183 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 ZNF148Q9UQR1 794 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 WDR37Q9Y2I8 494 aa13.84□□□□□ -0.19
RTFDC1-204ENST00000449062 IGLV3-16A0A075B6K0 115 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 PRAMEF33A0A0G2JMD5 474 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ERI2A8K979 691 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 CCL22O00626 93 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ZW10O43264 779 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 RPL22P35268 128 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ETV5P41161 510 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 GRIA1P42261 906 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SEMA5AQ13591 1074 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SNX1Q13596 522 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 CLCA4Q14CN2 919 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 INSCQ1MX18 579 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 TMEM71Q6P5X7 295 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 WDR74Q6RFH5 385 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ARHGAP22Q7Z5H3 698 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC9B2Q86UD5 537 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 AMZ2Q86W34 360 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SPACA3Q8IXA5 215 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 TAB3Q8N5C8 712 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ZNF248Q8NDW4 579 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 GDAP1Q8TB36 358 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 TMEM159Q96B96 161 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SH3KBP1Q96B97 665 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 CDKN2AIPNLQ96HQ2 116 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 DNAJC1Q96KC8 554 aaKnown RBP13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ALS2CR12Q96Q35 445 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 DPYSL5Q9BPU6 564 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC40A1Q9NP59 571 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 NLE1Q9NVX2 485 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 OGFRQ9NZT2 677 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 ACSL6Q9UKU0 697 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 LHX6Q9UPM6 363 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 DNAJC16Q9Y2G8 782 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 LOXL2Q9Y4K0 774 aa13.83□□□□□ -0.2
RTFDC1-204ENST00000449062 SMG1Q96Q15 3661 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 LILRA5A6NI73 299 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 HGSO14964 777 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 NVLO15381 856 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 RRP8O43159 456 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 FGGP02679 453 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 ZSCAN5DPP0CG00 497 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 THRAP10827 490 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 CCL4P13236 92 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC2A4P14672 509 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 IDSP22304 550 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 RPL10P27635 214 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC5A2P31639 672 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 FDFT1P37268 417 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 HADHAP40939 763 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 CDKN1CP49918 316 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 EPHA4P54764 986 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 PCBP4P57723 403 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 TRA2AQ13595 282 aaKnown RBP eCLIP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 PLA2G4EQ3MJ16 856 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 GPR33Q49SQ1 333 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 ZNF658BQ4V348 819 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 METRNLQ641Q3 311 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 TMEM26Q6ZUK4 368 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 SNX20Q7Z614 316 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 LINC00523Q86TU6 105 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 TRAPPC5Q8IUR0 188 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 PIANPQ8IYJ0 282 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 NXPE1Q8N323 547 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 OR52K1Q8NGK4 314 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 NAT14Q8WUY8 206 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 ZNF514Q96K75 400 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 LINC00615Q96LM1 132 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 TTC25Q96NG3 672 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC38A3Q99624 504 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 B3GNT4Q9C0J1 378 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 KCNF1Q9H3M0 494 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 FAM96AQ9H5X1 160 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 PRORYQ9H606 182 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 PIH1D1Q9NWS0 290 aaKnown RBP13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 ZKSCAN5Q9Y2L8 839 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 SLC30A1Q9Y6M5 507 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 PIEZO2Q9H5I5 2752 aa13.82□□□□□ -0.2
RTFDC1-204ENST00000449062 MGAT4DA6NG13 374 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 OR2AG2A6NM03 316 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 OR52A4PA6NMU1 304 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 IFNB1P01574 187 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 PRSS56P0CW18 603 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 FGF3P11487 239 aaPredicted RBP13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 ITIH1P19827 911 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 MPSTP25325 297 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 CXCR5P32302 372 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 ARSDP51689 593 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 DRG2P55039 364 aaKnown RBP13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 TMPRSS15P98073 1019 aa13.81□□□□□ -0.2
RTFDC1-204ENST00000449062 BIRC2Q13490 618 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms