RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 PTGDR2Q9Y5Y4 395 aa13.52□□□□□ -0.24
RBM39-216ENST00000444878 PRSS21Q9Y6M0 314 aa13.52□□□□□ -0.24
RBM39-216ENST00000444878 A0A1B0GTL3 188 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 SNRPB2P08579 225 aaKnown RBP13.52□□□□□ -0.25
RBM39-216ENST00000444878 HOXA9P31269 272 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 ATP4BP51164 291 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 PTPN5P54829 565 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 UBE3AQ05086 875 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 ZNF77Q15935 545 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 RBBP7Q16576 425 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 KIF19Q2TAC6 998 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 C4orf46Q504U0 113 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 Q6ZVU0 165 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 GPR26Q8NDV2 337 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 OR56A4Q8NGH8 313 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 SPACA7Q96KW9 195 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 ZNF641Q96N77 438 aaPredicted RBP13.52□□□□□ -0.25
RBM39-216ENST00000444878 HTATIP2Q9BUP3 242 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 BTRCQ9Y297 605 aa13.52□□□□□ -0.25
RBM39-216ENST00000444878 LINC01553A4QN01 128 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 ESRRBO95718 433 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 CHEK2O96017 543 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.251e-12■■■□□ 14.6
RBM39-216ENST00000444878 ALDOCP09972 364 aaKnown RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 LINC00032P0C843 101 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 DGKAP23743 735 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 RECQLP46063 649 aaPredicted RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 DMC1Q14565 340 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 PIGGQ5H8A4 983 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 ZNF697Q5TEC3 545 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 GRASPQ7Z6J2 395 aaPredicted RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 MYO1HQ8N1T3 1032 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 NXPE1Q8N323 547 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 LKAAEAR1Q8TD35 194 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 SLC25A23Q9BV35 468 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 TUBB1Q9H4B7 451 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 EIF2B4Q9UI10 523 aaKnown RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 PPIL1Q9Y3C6 166 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 TIMM22Q9Y584 194 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 WNT6Q9Y6F9 365 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 E2F3O00716 465 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 MAP3K7O43318 606 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 S100BP04271 92 aaPredicted RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 HSPA8P11142 646 aaKnown RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 LBPP18428 481 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 PRDX3P30048 256 aaKnown RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 ACADVLP49748 655 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 THOP1P52888 689 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 PKNOX1P55347 436 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 PTSQ03393 145 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 SBSNQ6UWP8 590 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 MACC1Q6ZN28 852 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 EFL1Q7Z2Z2 1120 aaKnown RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 SYVN1Q86TM6 617 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 ADIPOR2Q86V24 386 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 SNX31Q8N9S9 440 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 CHST14Q8NCH0 376 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 OR9I1Q8NGQ6 314 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 ZSWIM3Q96MP5 696 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 MCCC1Q96RQ3 725 aaPredicted RBP13.51□□□□□ -0.25
RBM39-216ENST00000444878 BRD9Q9H8M2 597 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 POLG2Q9UHN1 485 aa13.51□□□□□ -0.25
RBM39-216ENST00000444878 A0A1W2PQ67 120 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 RAD51BO15315 384 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 VPS4BO75351 444 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 UROSP10746 265 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 HGFP14210 728 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 POLR2EP19388 210 aaKnown RBP13.5□□□□□ -0.25
RBM39-216ENST00000444878 ATP6V1C1P21283 382 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 LHCGRP22888 699 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 ME2P23368 584 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 DPP6P42658 865 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 NSG1P42857 185 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 POLR2LP62875 67 aaKnown RBP13.5□□□□□ -0.25
RBM39-216ENST00000444878 GRB7Q14451 532 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 CBX2Q14781 532 aaPredicted RBP13.5□□□□□ -0.25
RBM39-216ENST00000444878 ZNF423Q2M1K9 1284 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 PRSS36Q5K4E3 855 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 TRIM68Q6AZZ1 485 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 REP15Q6BDI9 236 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 PAOXQ6QHF9 649 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 GPRIN3Q6ZVF9 776 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 SPRED2Q7Z698 418 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 ADGRG2Q8IZP9 1017 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 AHI1Q8N157 1196 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 ZBTB2Q8N680 514 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 ING5Q8WYH8 240 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 KLHL32Q96NJ5 620 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 PLEKHG4BQ96PX9 1271 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 NUSAP1Q9BXS6 441 aaKnown RBP13.5□□□□□ -0.25
RBM39-216ENST00000444878 FAM126AQ9BYI3 521 aaPredicted RBP13.5□□□□□ -0.25
RBM39-216ENST00000444878 PFDN4Q9NQP4 134 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 CACNA2D2Q9NY47 1150 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 GIMAP2Q9UG22 337 aa13.5□□□□□ -0.25
RBM39-216ENST00000444878 ASB1Q9Y576 335 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms