RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 RAVER1Q8IY67 606 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 KYQ8NBH2 561 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 PDPRQ8NCN5 879 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 CYB5D2Q8WUJ1 264 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 TWIST2Q8WVJ9 160 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 ASB16Q96NS5 453 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 SERPINI1Q99574 410 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 EFCAB1Q9HAE3 211 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 TNFRSF12AQ9NP84 129 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 THG1LQ9NWX6 298 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 GDE1Q9NZC3 331 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 OARD1Q9Y530 152 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 TTC34A8MYJ7 566 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 CFAP99D6REC4 459 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 CCNT2O60583 730 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 ENTPD5O75356 428 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 ESRRBO95718 433 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 PDGFRLQ15198 375 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 ARSIQ5FYB1 569 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 GPRC6AQ5T6X5 926 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 TMEM198Q66K66 360 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 LARP4Q71RC2 724 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNX13-204ENST00000444712 NPAS3Q8IXF0 933 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 TIFAQ96CG3 184 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 HGH1Q9BTY7 390 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 G3BP2Q9UN86 482 aaKnown RBP15.48■□□□□ 0.07
SNX13-204ENST00000444712 DNAJC15Q9Y5T4 150 aa15.48■□□□□ 0.07
SNX13-204ENST00000444712 A0A088AWK7 358 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 NCF1BA6NI72 391 aaPredicted RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 NCF1CA8MVU1 366 aaPredicted RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 KPNA5O15131 536 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 TULP3O75386 442 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 UROSP10746 265 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 NCF1P14598 390 aaPredicted RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 GM2AP17900 193 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 TSPAN8P19075 237 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 STX5Q13190 355 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 ATP13A5Q4VNC0 1218 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 C1orf146Q5VVC0 180 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 FAM109BQ6ICB4 259 aaPredicted RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 SBSNQ6UWP8 590 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 DEFB107AQ8IZN7 70 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 C12orf76Q8N812 135 aaPredicted RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 NSUN5Q96P11 429 aaKnown RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 ZNF382Q96SR6 550 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 TRPV4Q9HBA0 871 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 RDH14Q9HBH5 336 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 SEMA4BQ9NPR2 832 aaPredicted RBP15.47■□□□□ 0.07
SNX13-204ENST00000444712 ELOVL2Q9NXB9 296 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 SLC7A8Q9UHI5 535 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 PRSS21Q9Y6M0 314 aa15.47■□□□□ 0.07
SNX13-204ENST00000444712 LRRC14BA6NHZ5 514 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 QSOX1O00391 747 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 FFAR2O15552 330 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 PRNPP04156 253 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 NUDT2P50583 147 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 HK3P52790 923 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 TBL3Q12788 808 aaKnown RBP15.46■□□□□ 0.07
SNX13-204ENST00000444712 RBBP7Q16576 425 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ACSBG2Q5FVE4 666 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 FAM78AQ5JUQ0 283 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ERAP2Q6P179 960 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 DPPA4Q7L190 304 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ETFBKMTQ8IXQ9 262 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 CLDN19Q8N6F1 224 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 JADE3Q92613 823 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 DCUN1D1Q96GG9 259 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ANKRD27Q96NW4 1050 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 LRRC3BQ96PB8 259 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 SPATA16Q9BXB7 569 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 FAM83DQ9H4H8 585 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 DEC1Q9P2X7 70 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 CDH22Q9UJ99 828 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 MUC22E2RYF6 1773 aaPredicted RBP15.46■□□□□ 0.07
SNX13-204ENST00000444712 PSMD11O00231 422 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 PSMD12O00232 456 aaPredicted RBP15.46■□□□□ 0.07
SNX13-204ENST00000444712 E2F3O00716 465 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 TRIM24O15164 1050 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 PSMG1O95456 288 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 VCLP18206 1134 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ACADVLP49748 655 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ACTR3P61158 418 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ART3Q13508 389 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 KCNC3Q14003 757 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 FASTKQ14296 549 aaKnown RBP15.46■□□□□ 0.07
SNX13-204ENST00000444712 SHHQ15465 462 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 CDKL4Q5MAI5 379 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 TRIM68Q6AZZ1 485 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 PGM2L1Q6PCE3 622 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 TTC23LQ6PF05 361 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 GPRIN3Q6ZVF9 776 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 DDIASQ8IXT1 998 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 LKAAEAR1Q8TD35 194 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 ZSCAN5AQ9BUG6 496 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 EBF2Q9HAK2 575 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 PCDH12Q9NPG4 1184 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 STOML1Q9UBI4 398 aa15.46■□□□□ 0.07
SNX13-204ENST00000444712 YBX2Q9Y2T7 364 aaKnown RBP15.46■□□□□ 0.07
SNX13-204ENST00000444712 L3MBTL1Q9Y468 752 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms