RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 XRCC4Q13426 336 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF648Q5T619 568 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 TIPARPQ7Z3E1 657 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 C11orf96Q7Z7L8 435 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 BPHLQ86WA6 291 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 TTC30BQ8N4P2 665 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 GDAP1Q8TB36 358 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 CXorf40BQ96DE9 158 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 RBM41Q96IZ5 413 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 FCRL4Q96PJ5 515 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 C19orf43Q9BQ61 176 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 TSPY26PQ9H489 355 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 ARFGAP3Q9NP61 516 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 IL26Q9NPH9 171 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 SMOXQ9NWM0 555 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 IL17CQ9P0M4 197 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 SEMA5BQ9P283 1151 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 KLHL8Q9P2G9 620 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 PKP3Q9Y446 797 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 SPO11Q9Y5K1 396 aa16.04■□□□□ 0.16
CTDSP1-204ENST00000443891 LOC101059948A0A1B0GTJ6 334 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 SLC4A1P02730 911 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 MT-ND3P03897 115 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 PYGMP11217 842 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 BRAFP15056 766 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 NFKB1P19838 968 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 COPS2P61201 443 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 CDC20Q12834 499 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 TBX2Q13207 712 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 SLC1A5Q15758 541 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 PPP2R5EQ16537 467 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 PID1Q7Z2X4 250 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 AMZ2Q86W34 360 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 TRAPPC5Q8IUR0 188 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 BEND7Q8N7W2 519 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 DDHD1Q8NEL9 900 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 APOBEC4Q8WW27 367 aaKnown RBP16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 ZFPM2Q8WW38 1151 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 KLHL6Q8WZ60 621 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 MRGPRX2Q96LB1 330 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 CTRCQ99895 268 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 APMAPQ9HDC9 416 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 KLHL3Q9UH77 587 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 TMPRSS11EQ9UL52 423 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 EFR3BQ9Y2G0 817 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 DNAJC16Q9Y2G8 782 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 PCDHB3Q9Y5E6 796 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 SLC30A1Q9Y6M5 507 aa16.03■□□□□ 0.16
CTDSP1-204ENST00000443891 hCG_1818297A0A087WSY0 165 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 GLYATL1P3A0A0U1RQE8 302 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 AURKAO14965 403 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 MTX2O75431 263 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 ANXA9O76027 345 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 LCA5LO95447 670 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 FGF5P12034 268 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 TNNT1P13805 278 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 TCN2P20062 427 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 MAGEA1P43355 309 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 GFERP55789 205 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 FOXM1Q08050 763 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 SIRPB2Q5JXA9 342 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 C11orf63Q6NUN7 778 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 C6orf15Q6UXA7 325 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 GLT6D1Q7Z4J2 308 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 ZNF567Q8N184 647 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 UBXN4Q92575 508 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 TGM7Q96PF1 710 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 QKIQ96PU8 341 aaKnown RBP eCLIP16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 CD180Q99467 661 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 ULBP3Q9BZM4 244 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 BPIFA1Q9NP55 256 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 UBP1Q9NZI7 540 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 SAE1Q9UBE0 346 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 ANAPC2Q9UJX6 822 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 KCND3Q9UK17 655 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 KCTD3Q9Y597 815 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 RPS6KL1Q9Y6S9 549 aa16.02■□□□□ 0.16
CTDSP1-204ENST00000443891 TLN1Q9Y490 2541 aaKnown RBP16.02■□□□□ 0.15
CTDSP1-204ENST00000443891 APOC4-APOC2K7ER74 178 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 RASSF9O75901 435 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 APOC2P02655 101 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 PECAM1P16284 738 aaPredicted RBP16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 TYRP1P17643 537 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 NELFEP18615 380 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 RPL10P27635 214 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 GEMP55040 296 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 PDE1BQ01064 536 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 SEPT6Q14141 434 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 GPR18Q14330 331 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 SEPT7Q16181 437 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 LONRF2Q1L5Z9 754 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 PLA2G4EQ3MJ16 856 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 KHDC1Q4VXA5 237 aaKnown RBP16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 CACHD1Q5VU97 1274 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 KAZNQ674X7 775 aa16.01■□□□□ 0.15
CTDSP1-204ENST00000443891 ITPRIPL1Q6GPH6 555 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms