RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 LATS2Q9NRM7 1088 aa13.01□□□□□ -0.33
CPSF4-206ENST00000441580 IKZF3Q9UKT9 509 aa13.01□□□□□ -0.33
CPSF4-206ENST00000441580 PRPF19Q9UMS4 504 aaKnown RBP13.01□□□□□ -0.33
CPSF4-206ENST00000441580 OARD1Q9Y530 152 aa13.01□□□□□ -0.33
CPSF4-206ENST00000441580 COPG1Q9Y678 874 aaKnown RBP13.01□□□□□ -0.33
CPSF4-206ENST00000441580 MYOFQ9NZM1 2061 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 HEPACAM2A8MVW5 462 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 UBFD1O14562 309 aaKnown RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 KPNA5O15131 536 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 UBDO15205 165 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 SLC25A14O95258 325 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 SIX3O95343 332 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 ESRRBO95718 433 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 ENO2P09104 434 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 MMP12P39900 470 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 PIK3CGP48736 1102 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 PTSQ03393 145 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 CYLC2Q14093 348 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
CPSF4-206ENST00000441580 SHHQ15465 462 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 RBBP7Q16576 425 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 PREPLQ4J6C6 727 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 CDKL4Q5MAI5 379 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 RARS2Q5T160 578 aaKnown RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 GPRC6AQ5T6X5 926 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 TTC23LQ6PF05 361 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 SBSNQ6UWP8 590 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 GPR149Q86SP6 731 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 C12orf40Q86WS4 652 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 C12orf76Q8N812 135 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 LKAAEAR1Q8TD35 194 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 UCMAQ8WVF2 138 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 OR8D1Q8WZ84 308 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 JADE3Q92613 823 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 FGF13Q92913 245 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 DCUN1D1Q96GG9 259 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 PPP1R16AQ96I34 528 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 NKX2-4Q9H2Z4 354 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 DENND2DQ9H6A0 471 aaPredicted RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 RDH14Q9HBH5 336 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 PCDH12Q9NPG4 1184 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 ELOVL2Q9NXB9 296 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 NOP53Q9NZM5 478 aaKnown RBP13□□□□□ -0.33
CPSF4-206ENST00000441580 DEC1Q9P2X7 70 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 GALPQ9UBC7 116 aa13□□□□□ -0.33
CPSF4-206ENST00000441580 PABPN1LA6NDY0 278 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 IQCF5A8MTL0 148 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 H0Y858 1186 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 FFAR2O15552 330 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 CCNT2O60583 730 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 GPC4O75487 556 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 TRIM16O95361 564 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 UROSP10746 265 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 BMP1P13497 986 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 ARSAP15289 507 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 VCLP18206 1134 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 ITGAXP20702 1163 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 ITGB7P26010 798 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 AKT1P31749 480 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 VIPR2P41587 438 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 NUDT2P50583 147 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 CDH13P55290 713 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 ELP6Q0PNE2 266 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 RALGDSQ12967 914 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 ELAVL3Q14576 367 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 E2F5Q15329 346 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 PPP1R3AQ16821 1122 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 ATP13A5Q4VNC0 1218 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 FNDC3BQ53EP0 1204 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 TRIM68Q6AZZ1 485 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 CLEC6AQ6EIG7 209 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 GPRIN3Q6ZVF9 776 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 RPS27LQ71UM5 84 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 NRSN1Q8IZ57 195 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 TCAIMQ8N3R3 496 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 DDHD1Q8NEL9 900 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 TRPC4APQ8TEL6 797 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 SORCS1Q8WY21 1168 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 MRPL38Q96DV4 380 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 LRRC3BQ96PB8 259 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 LENG8Q96PV6 779 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 VPS35Q96QK1 796 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 SERPINI1Q99574 410 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 THTPAQ9BU02 230 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 SPATA16Q9BXB7 569 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 PBX4Q9BYU1 374 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 FAM83DQ9H4H8 585 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 DCLRE1BQ9H816 532 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 TNFRSF12AQ9NP84 129 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 EIF2B4Q9UI10 523 aaKnown RBP12.99□□□□□ -0.33
CPSF4-206ENST00000441580 PRSS21Q9Y6M0 314 aa12.99□□□□□ -0.33
CPSF4-206ENST00000441580 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-206ENST00000441580 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-206ENST00000441580 NCF1BA6NI72 391 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-206ENST00000441580 BBIP1A8MTZ0 92 aa12.98□□□□□ -0.33
CPSF4-206ENST00000441580 NCF1CA8MVU1 366 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-206ENST00000441580 A8MX80 341 aa12.98□□□□□ -0.33
CPSF4-206ENST00000441580 E2F3O00716 465 aa12.98□□□□□ -0.33
CPSF4-206ENST00000441580 PIP5K1BO14986 540 aa12.98□□□□□ -0.33
CPSF4-206ENST00000441580 FTH1P02794 183 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms