RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ULK4Q96C45 1275 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 TIFAQ96CG3 184 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 RCN3Q96D15 328 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 CCDC97Q96F63 343 aaPredicted RBP25.39■■□□□ 1.65
CPNE1-216ENST00000437340 SERPINI1Q99574 410 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 HEPHQ9BQS7 1158 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 ZDHHC3Q9NYG2 299 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 KLHL42Q9P2K6 505 aa25.39■■□□□ 1.65
CPNE1-216ENST00000437340 TNPO3Q9Y5L0 923 aaKnown RBP25.39■■□□□ 1.65
CPNE1-216ENST00000437340 PDE4DIPQ5VU43 2346 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 C2orf16Q68DN1 1984 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 NCF1BA6NI72 391 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-216ENST00000437340 NCF1CA8MVU1 366 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-216ENST00000437340 FKBP6O75344 327 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 SLC25A14O95258 325 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-216ENST00000437340 NCF1P14598 390 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-216ENST00000437340 ACADVLP49748 655 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 STX5Q13190 355 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 PGAM4Q8N0Y7 254 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 MYO1HQ8N1T3 1032 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 PBXIP1Q96AQ6 731 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 MRGPRX3Q96LB0 322 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 KLHL32Q96NJ5 620 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 SEMA4BQ9NPR2 832 aaPredicted RBP25.38■■□□□ 1.65
CPNE1-216ENST00000437340 UTP6Q9NYH9 597 aaKnown RBP25.38■■□□□ 1.65
CPNE1-216ENST00000437340 SLC8A2Q9UPR5 921 aa25.38■■□□□ 1.65
CPNE1-216ENST00000437340 PSMD12O00232 456 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-216ENST00000437340 ESRRBO95718 433 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 ZNF30P17039 623 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 NFKBIAP25963 317 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 PTDSS1P48651 473 aaKnown RBP25.37■■□□□ 1.65
CPNE1-216ENST00000437340 FOXA1P55317 472 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 PCBP2Q15366 365 aaKnown RBP eCLIP25.37■■□□□ 1.651e-7■□□□□ 10.9
CPNE1-216ENST00000437340 DHCR24Q15392 516 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 GPRC6AQ5T6X5 926 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 AAGABQ6PD74 315 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 SBSNQ6UWP8 590 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 FRA10AC1Q70Z53 315 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 JADE3Q92613 823 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 C3orf30Q96M34 536 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 HGH1Q9BTY7 390 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 AKTIPQ9H8T0 292 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 SPATS2LQ9NUQ6 558 aaKnown RBP25.37■■□□□ 1.65
CPNE1-216ENST00000437340 B4GALT6Q9UBX8 382 aa25.37■■□□□ 1.65
CPNE1-216ENST00000437340 PIP5K1BO14986 540 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 AGTR2P50052 363 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 ART3Q13508 389 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 FASTKQ14296 549 aaKnown RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 CBX2Q14781 532 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 ZBTB2Q8N680 514 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 CLDN19Q8N6F1 224 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 LKAAEAR1Q8TD35 194 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 WFIKKN2Q8TEU8 576 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 PIDD1Q9HB75 910 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 PFDN4Q9NQP4 134 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 TSPAN11A1L157 253 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 GIPC1O14908 333 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 RAD51BO15315 384 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 TBX10O75333 385 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 TRIM16O95361 564 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 PAPLNO95428 1278 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 S100BP04271 92 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 ASLP04424 464 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 SRPRAP08240 638 aaKnown RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 C1SP09871 688 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 UROSP10746 265 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 CYP2A6P11509 494 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 SPINT3P49223 89 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 AP2B1P63010 937 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 TTLL9Q3SXZ7 439 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 NAT16Q8N8M0 369 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 VN1R2Q8NFZ6 395 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 OSCP1Q8WVF1 389 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 COPS8Q99627 209 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 CCT7Q99832 543 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 MRPL1Q9BYD6 325 aaKnown RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 FAM126AQ9BYI3 521 aaPredicted RBP25.36■■□□□ 1.65
CPNE1-216ENST00000437340 PKD2L2Q9NZM6 624 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 ANGPTL2Q9UKU9 493 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 POMPQ9Y244 141 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 WASF2Q9Y6W5 498 aa25.36■■□□□ 1.65
CPNE1-216ENST00000437340 IGLV3-16A0A075B6K0 115 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 E2F3O00716 465 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 CRCPO75575 148 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 PKNOX1P55347 436 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 STX1BP61266 288 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 ARHGEF7Q14155 803 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 PHYKPLQ8IUZ5 450 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 PDPRQ8NCN5 879 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 HMGCLL1Q8TB92 370 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 ITFG1Q8TB96 612 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 DTX3LQ8TDB6 740 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 SMG7Q92540 1137 aaKnown RBP25.35■■□□□ 1.65
CPNE1-216ENST00000437340 LRIG1Q96JA1 1093 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 ZNF382Q96SR6 550 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 DUS2Q9NX74 493 aaKnown RBP25.35■■□□□ 1.65
CPNE1-216ENST00000437340 OARD1Q9Y530 152 aa25.35■■□□□ 1.65
CPNE1-216ENST00000437340 HOXC11O43248 304 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-216ENST00000437340 PDE5AO76074 875 aa25.34■■□□□ 1.65
CPNE1-216ENST00000437340 CHEK2O96017 543 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms