RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 ASB2Q96Q27 587 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 NOL11Q9H8H0 719 aaKnown RBP14.49□□□□□ -0.09
RFTN1-203ENST00000432519 SPAG4Q9NPE6 437 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 SDR39U1Q9NRG7 319 aaPredicted RBP14.49□□□□□ -0.09
RFTN1-203ENST00000432519 ELOVL2Q9NXB9 296 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 SLAMF8Q9P0V8 285 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 TMEM181Q9P2C4 612 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 LSM7Q9UK45 103 aaKnown RBP14.49□□□□□ -0.09
RFTN1-203ENST00000432519 VPS9D1Q9Y2B5 631 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 GPR45Q9Y5Y3 372 aa14.49□□□□□ -0.09
RFTN1-203ENST00000432519 NME4O00746 187 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 SNX2O60749 519 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 CRCPO75575 148 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 SLC25A14O95258 325 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 TIMP1P01033 207 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 LYNP07948 512 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 LBPP18428 481 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 PSMD8P48556 350 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 STX1BP61266 288 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 FUT11Q495W5 492 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 RNF220Q5VTB9 566 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 PTRHD1Q6GMV3 140 aaKnown RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 CAPRIN2Q6IMN6 1127 aaKnown RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 MBOAT1Q6ZNC8 495 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 KREMEN2Q8NCW0 462 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 FIBINQ8TAL6 211 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 GRIN3AQ8TCU5 1115 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 ACDQ96AP0 544 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 SLCO4A1Q96BD0 722 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 ZDHHC7Q9NXF8 308 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 CROTQ9UKG9 612 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 NOTCH4Q99466 2003 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 EME2A4GXA9 379 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 KATNA1O75449 491 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 PRR35P0CG20 571 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 CD9P21926 228 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 LHCGRP22888 699 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 SOX11P35716 441 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 UFM1P61960 85 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 ADGRE1Q14246 886 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 MAPRE2Q15555 327 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 XKR7Q5GH72 579 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 AARS2Q5JTZ9 985 aaKnown RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 Q6ZSR9 355 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 MIER2Q8N344 545 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 SEMA6AQ9H2E6 1030 aa14.48□□□□□ -0.09
RFTN1-203ENST00000432519 CXXC1Q9P0U4 656 aaPredicted RBP14.48□□□□□ -0.09
RFTN1-203ENST00000432519 ZBBXA8MT70 800 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 VCLP18206 1134 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 PIK3CGP48736 1102 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 ATP4BP51164 291 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 GK3PQ14409 553 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 MPPE1Q53F39 396 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 FOXB2Q5VYV0 432 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 CRTC1Q6UUV9 634 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 FAM43BQ6ZT52 329 aaPredicted RBP14.47□□□□□ -0.09
RFTN1-203ENST00000432519 OR2AP1Q8NGE2 309 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 DCUN1D1Q96GG9 259 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 CLPBQ9H078 707 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 LINC00597Q9H2U6 94 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 KRT87PA6NCN2 255 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 OR7A17O14581 309 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 TAPBPO15533 448 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 IL12AP29459 219 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 ARL1P40616 181 aaPredicted RBP14.47□□□□□ -0.09
RFTN1-203ENST00000432519 HSPA7P48741 367 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 GPRIN3Q6ZVF9 776 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 SNX20Q7Z614 316 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 CPXM2Q8N436 756 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 TMEM102Q8N9M5 508 aaPredicted RBP14.47□□□□□ -0.09
RFTN1-203ENST00000432519 CHST14Q8NCH0 376 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 PPP2R3CQ969Q6 453 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 GPATCH1Q9BRR8 931 aaKnown RBP14.47□□□□□ -0.09
RFTN1-203ENST00000432519 KIAA1522Q9P206 1035 aaPredicted RBP14.47□□□□□ -0.09
RFTN1-203ENST00000432519 SUCOQ9UBS9 1254 aaKnown RBP14.47□□□□□ -0.09
RFTN1-203ENST00000432519 DTNAQ9Y4J8 743 aa14.47□□□□□ -0.09
RFTN1-203ENST00000432519 TRAV19A0A0A6YYK7 116 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 GLYATL1P3A0A0U1RQE8 302 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 CYBBP04839 570 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 CAPN1P07384 714 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 ACRV1P26436 265 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 TLR1Q15399 786 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 SLC5A9Q2M3M2 681 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 PAGE3Q5JUK9 113 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 LRRC66Q68CR7 880 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 DPY19L3Q6ZPD9 716 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 TICAM1Q8IUC6 712 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 APOL5Q9BWW9 433 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 ATP13A3Q9H7F0 1226 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.46□□□□□ -0.09
RFTN1-203ENST00000432519 C6orf203Q9P0P8 240 aaPredicted RBP14.46□□□□□ -0.09
RFTN1-203ENST00000432519 EGFL7Q9UHF1 273 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 ST14Q9Y5Y6 855 aa14.46□□□□□ -0.09
RFTN1-203ENST00000432519 SPTBN5Q9NRC6 3674 aaKnown RBP14.46□□□□□ -0.1
RFTN1-203ENST00000432519 TRBV5-4A0A0C4DH59 114 aa14.46□□□□□ -0.1
RFTN1-203ENST00000432519 PFDN6O15212 129 aa14.46□□□□□ -0.1
RFTN1-203ENST00000432519 FFAR2O15552 330 aa14.46□□□□□ -0.1
RFTN1-203ENST00000432519 UROSP10746 265 aa14.46□□□□□ -0.1
RFTN1-203ENST00000432519 UQCRBP14927 111 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms