RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ZNF547Q8IVP9 402 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 FAM71DQ8N9W8 422 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 OR4K2Q8NGD2 314 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 ZNF398Q8TD17 642 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 TMEM9Q9P0T7 183 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 FEZ2Q9UHY8 353 aaPredicted RBP17.31■□□□□ 0.36
NUP50-208ENST00000430547 ACSL6Q9UKU0 697 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 PCDHB11Q9Y5F2 797 aa17.31■□□□□ 0.36
NUP50-208ENST00000430547 LILRA5A6NI73 299 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 ARHGAP6O43182 974 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 GPR39O43194 453 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 KCNJ13O60928 360 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 CCL4P13236 92 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 XRCC1P18887 633 aaPredicted RBP17.3■□□□□ 0.36
NUP50-208ENST00000430547 RPL10P27635 214 aaKnown RBP17.3■□□□□ 0.36
NUP50-208ENST00000430547 CD82P27701 267 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 VAC14Q08AM6 782 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 KLF1Q13351 362 aaPredicted RBP17.3■□□□□ 0.36
NUP50-208ENST00000430547 PTPRCAPQ14761 206 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 PARP6Q2NL67 630 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 AMZ2Q86W34 360 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 FAM129CQ86XR2 697 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 CXorf40BQ96DE9 158 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 CCNL2Q96S94 520 aaPredicted RBP17.3■□□□□ 0.36
NUP50-208ENST00000430547 ASB8Q9H765 288 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 SMOXQ9NWM0 555 aa17.3■□□□□ 0.36
NUP50-208ENST00000430547 OR2AG2A6NM03 316 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 A8MU76 341 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 SRP72O76094 671 aaKnown RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 HADHAP40939 763 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 DRG2P55039 364 aaKnown RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 UBE2IP63279 158 aaKnown RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 CFHR1Q03591 330 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 SPARCL1Q14515 664 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 SOWAHCQ53LP3 525 aaPredicted RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 TMEM220Q6QAJ8 160 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 RASGEF1AQ8N9B8 481 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 ZNF514Q96K75 400 aaPredicted RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 TAAR9Q96RI9 348 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 TMEM121Q9BTD3 319 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 TBC1D10AQ9BXI6 508 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 B3GNT4Q9C0J1 378 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 LRRC40Q9H9A6 602 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 UCK1Q9HA47 277 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 POT1Q9NUX5 634 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 FOXJ2Q9P0K8 574 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 SCHIP1Q9P0W5 487 aaPredicted RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 FKBPLQ9UIM3 349 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 CRLS1Q9UJA2 301 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 R3HDM2Q9Y2K5 976 aaKnown RBP17.29■□□□□ 0.36
NUP50-208ENST00000430547 AHCTF1Q8WYP5 2266 aa17.29■□□□□ 0.36
NUP50-208ENST00000430547 SDK2Q58EX2 2172 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 EFCAB7A8K855 629 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 C9orf172C9J069 976 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 GAPDHSO14556 408 aaPredicted RBP17.28■□□□□ 0.36
NUP50-208ENST00000430547 PSMD3O43242 534 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 NRDCO43847 1150 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 RALBP11234 206 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 AMD1P17707 334 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 PBLDP30039 288 aaPredicted RBP17.28■□□□□ 0.36
NUP50-208ENST00000430547 SLC19A1P41440 591 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 TMPRSS15P98073 1019 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 FNBP1LQ5T0N5 605 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 AGAP9Q5VTM2 703 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 ABRAXAS1Q6UWZ7 409 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 WASH2PQ6VEQ5 465 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 TMEM26Q6ZUK4 368 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 C11orf96Q7Z7L8 435 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 PLXDC1Q8IUK5 500 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 RBM12BQ8IXT5 1001 aaKnown RBP17.28■□□□□ 0.36
NUP50-208ENST00000430547 SLC35B2Q8TB61 432 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 ART4Q93070 314 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 ULK4Q96C45 1275 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 DCUN1D1Q96GG9 259 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 ALS2CR12Q96Q35 445 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 ARNT2Q9HBZ2 717 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 WASH6PQ9NQA3 447 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 SLC39A1Q9NY26 324 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 ZNF624Q9P2J8 865 aaPredicted RBP17.28■□□□□ 0.36
NUP50-208ENST00000430547 KLHL3Q9UH77 587 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 KCTD3Q9Y597 815 aa17.28■□□□□ 0.36
NUP50-208ENST00000430547 DNMT3AQ9Y6K1 912 aaPredicted RBP17.28■□□□□ 0.36
NUP50-208ENST00000430547 TCRBV7S2A1N4TA0A589 114 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 STMND1H3BQB6 276 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 POP7O75817 140 aaKnown RBP17.27■□□□□ 0.36
NUP50-208ENST00000430547 UBXN7O94888 489 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 CCDC175P0C221 793 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 FGF3P11487 239 aaPredicted RBP17.27■□□□□ 0.36
NUP50-208ENST00000430547 ITGALP20701 1170 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 CTSCP53634 463 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 GDF10P55107 478 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 RAB15P59190 212 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 RHDQ02161 417 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 TGIF1Q15583 401 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 MANEAQ5SRI9 462 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 DET1Q7L5Y6 550 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 ZFAND4Q86XD8 727 aa17.27■□□□□ 0.36
NUP50-208ENST00000430547 TAB3Q8N5C8 712 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms