RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 EPB41L5Q9HCM4 733 aa12.25□□□□□ -0.45
USP40-205ENST00000430158 IL1RAPL1Q9NZN1 696 aa12.25□□□□□ -0.45
USP40-205ENST00000430158 CRLS1Q9UJA2 301 aa12.25□□□□□ -0.45
USP40-205ENST00000430158 GPR34Q9UPC5 381 aa12.25□□□□□ -0.45
USP40-205ENST00000430158 MAD1L1Q9Y6D9 718 aa12.25□□□□□ -0.45
USP40-205ENST00000430158 A6NCN8 305 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 GOLGA8KD6RF30 607 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 GOLGA8TH3BQL2 631 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 EIF3HO15372 352 aaKnown RBP eCLIP12.24□□□□□ -0.45
USP40-205ENST00000430158 FLRT2O43155 660 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 OR1I1O60431 355 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 C1QAP02745 245 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 CSRP1P21291 193 aaKnown RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 AK4P27144 223 aaPredicted RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 PRAMEP78395 509 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 PDIA2Q13087 525 aaKnown RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 LRP8Q14114 963 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 SUZ12Q15022 739 aaKnown RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 ELOCQ15369 112 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 HP1BP3Q5SSJ5 553 aaPredicted RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 NEPROQ6NW34 567 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 TMEM220Q6QAJ8 160 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 CERS6Q6ZMG9 384 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 CENPUQ71F23 418 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 TAS2R42Q7RTR8 314 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 LDB1Q86U70 411 aaPredicted RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 GALNT13Q8IUC8 556 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 CCNJLQ8IV13 435 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 SFTPA2Q8IWL1 248 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 FAM181AQ8N9Y4 354 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 HEXDCQ8WVB3 486 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 LINC00615Q96LM1 132 aaPredicted RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 TIMM29Q9BSF4 260 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 FOXP3Q9BZS1 431 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 FAM114A2Q9NRY5 505 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 CATSPERZQ9NTU4 200 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 SPATS2LQ9NUQ6 558 aaKnown RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 NLGN3Q9NZ94 848 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 SAMD15Q9P1V8 674 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 ZNHIT2Q9UHR6 403 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 CHMP2BQ9UQN3 213 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 NCOR2Q9Y618 2525 aa12.24□□□□□ -0.45
USP40-205ENST00000430158 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
USP40-205ENST00000430158 KMOO15229 486 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 SIGLEC6O43699 453 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 NOBOXO60393 691 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 TTC4O95801 387 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 EML2O95834 649 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 S1PR4O95977 384 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 POLBP06746 335 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 ATP1B2P14415 290 aaPredicted RBP12.23□□□□□ -0.45
USP40-205ENST00000430158 ZNF7P17097 686 aaPredicted RBP12.23□□□□□ -0.45
USP40-205ENST00000430158 MSH3P20585 1137 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 GRK6P43250 576 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 CARSP49589 748 aaKnown RBP12.23□□□□□ -0.45
USP40-205ENST00000430158 PRLHRP49683 370 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 GPX6P59796 221 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 DMPKQ09013 629 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 TCEA2Q15560 299 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 LONRF1Q17RB8 773 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 DEFB133Q30KQ1 61 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 FASTKD1Q53R41 847 aaKnown RBP12.23□□□□□ -0.45
USP40-205ENST00000430158 ZNF789Q5FWF6 425 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 SPANXN3Q5MJ09 141 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 LYPLAL1Q5VWZ2 237 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 TRMT10BQ6PF06 316 aaKnown RBP12.23□□□□□ -0.45
USP40-205ENST00000430158 CRTC3Q6UUV7 619 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 GLRX5Q86SX6 157 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 LRRTM4Q86VH4 590 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 CILP2Q8IUL8 1156 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 RELL1Q8IUW5 271 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 ANKMY2Q8IV38 441 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 CNTN4Q8IWV2 1026 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 CLDN19Q8N6F1 224 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 EID2Q8N6I1 236 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP40-205ENST00000430158 FBXO36Q8NEA4 188 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 GPR156Q8NFN8 814 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 GDAP1Q8TB36 358 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 LPGAT1Q92604 370 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 BIRC8Q96P09 236 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 FAM129AQ9BZQ8 928 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 P2RY12Q9H244 342 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 TAAR2Q9P1P5 351 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 ZC3H7BQ9UGR2 993 aaKnown RBP12.23□□□□□ -0.45
USP40-205ENST00000430158 MOSPD1Q9UJG1 213 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 GPSM3Q9Y4H4 160 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 SPEGQ15772 3267 aa12.23□□□□□ -0.45
USP40-205ENST00000430158 NEMP2A6NFY4 417 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 OR2AG2A6NM03 316 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 FFAR2O15552 330 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 POP7O75817 140 aaKnown RBP12.22□□□□□ -0.45
USP40-205ENST00000430158 DKK1O94907 266 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 AP2A2O94973 939 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 F7P08709 466 aaPredicted RBP12.22□□□□□ -0.45
USP40-205ENST00000430158 ACP5P13686 325 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 CTSEP14091 401 aa12.22□□□□□ -0.45
USP40-205ENST00000430158 OGNP20774 298 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms