RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 TSNAXIP1Q2TAA8 658 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 TECRLQ5HYJ1 363 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 PNCKQ6P2M8 343 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 CRTC3Q6UUV7 619 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 ADAMTSL4Q6UY14 1074 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 KYAT3Q6YP21 454 aaKnown RBP11.91□□□□□ -0.5
RFC4-206ENST00000427785 BEND7Q8N7W2 519 aaPredicted RBP11.91□□□□□ -0.5
RFC4-206ENST00000427785 RASGEF1AQ8N9B8 481 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 OR2T34Q8NGX1 318 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 EXT2Q93063 718 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 CLDN23Q96B33 292 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 LINGO1Q96FE5 620 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 GPR78Q96P69 363 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 OR2AG1Q9H205 316 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 DCDC2Q9UHG0 476 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 IKZF3Q9UKT9 509 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 RUVBL2Q9Y230 463 aaKnown RBP11.91□□□□□ -0.5
RFC4-206ENST00000427785 CA5BQ9Y2D0 317 aa11.91□□□□□ -0.5
RFC4-206ENST00000427785 TNRC6BQ9UPQ9 1833 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 LRRC72A6NJI9 287 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 SGTAO43765 313 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 ZBTB14O43829 449 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 APBB3O95704 486 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 PAK4O96013 591 aaPredicted RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 IGLV3-19P01714 112 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 OR56A5P0C7T3 313 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 COL6A2P12110 1019 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 CD1DP15813 335 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 TFEBP19484 476 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 LSP1P33241 339 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 KPNA2P52292 529 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 IL9RQ01113 521 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 BOP1Q14137 746 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 AGERQ15109 404 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 PLA2G4EQ3MJ16 856 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 PIWIL4Q7Z3Z4 852 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 CCDC91Q7Z6B0 441 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 ADGRG6Q86SQ4 1221 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 TRIM69Q86WT6 500 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 FSTL5Q8N475 847 aaPredicted RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 SPEM1Q8N4L4 309 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 FAM160A2Q8N612 972 aaPredicted RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 ZBTB2Q8N680 514 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 FRMD1Q8N878 549 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 CKAP2Q8WWK9 683 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 RLN3Q8WXF3 142 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 PTERQ96BW5 349 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 SGF29Q96ES7 293 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 TOE1Q96GM8 510 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 HIC2Q96JB3 615 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 PANX3Q96QZ0 392 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 C1QTNF7Q9BXJ2 289 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 SLC17A9Q9BYT1 436 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 ZCCHC2Q9C0B9 1178 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 RABEP2Q9H5N1 569 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 C6orf106Q9H6K1 298 aaPredicted RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 ALG9Q9H6U8 611 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 WDR26Q9H7D7 661 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 NMRAL1Q9HBL8 299 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 SGK2Q9HBY8 427 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 CPSF2Q9P2I0 782 aaKnown RBP11.9□□□□□ -0.5
RFC4-206ENST00000427785 ATXN10Q9UBB4 475 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 OR1A2Q9Y585 309 aa11.9□□□□□ -0.5
RFC4-206ENST00000427785 GON4LQ3T8J9 2241 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 SHOX2O60902 331 aaPredicted RBP11.89□□□□□ -0.51
RFC4-206ENST00000427785 AP2A2O94973 939 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 TSPAN12O95859 305 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 SBK3P0C264 359 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 BGNP21810 368 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 CD9P21926 228 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 KCNA4P22459 653 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 ALDH3A1P30838 453 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 RPS9P46781 194 aaKnown RBP11.89□□□□□ -0.51
RFC4-206ENST00000427785 PRLHRP49683 370 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 CLDN2P57739 230 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 TMEM115Q12893 351 aaPredicted RBP11.89□□□□□ -0.51
RFC4-206ENST00000427785 GTF2H3Q13889 308 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 INPP5AQ14642 412 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 FAM83EQ2M2I3 478 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 MAP7D1Q3KQU3 841 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 CCDC153Q494R4 210 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 AGAP9Q5VTM2 703 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 KLC3Q6P597 504 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 LCA5Q86VQ0 697 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 TRAPPC5Q8IUR0 188 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 EEF1AKMT1Q8WVE0 214 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 FUBP1Q96AE4 644 aaKnown RBP11.89□□□□□ -0.51
RFC4-206ENST00000427785 CENPTQ96BT3 561 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 COX14Q96I36 57 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 UBXN10Q96LJ8 280 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 LGR4Q9BXB1 951 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 KDM4CQ9H3R0 1056 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 SYTL2Q9HCH5 934 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 KCTD5Q9NXV2 234 aa11.89□□□□□ -0.51
RFC4-206ENST00000427785 TMEM98Q9Y2Y6 226 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms