RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DACT2Q5SW24 774 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CDCA2Q69YH5 1023 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 SCIMPQ6UWF3 145 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ZNF398Q8TD17 642 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 NCSTNQ92542 709 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 LINGO1Q96FE5 620 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PAFAH2Q99487 392 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 YIPF3Q9GZM5 350 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ALG9Q9H6U8 611 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PCDH9Q9HC56 1237 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 RSL24D1Q9UHA3 163 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 HCN2Q9UL51 889 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 OAS3Q9Y6K5 1087 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 A8MUA0 341 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 E5RJQ4 531 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FFAR3O14843 346 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GPR42O15529 346 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MAFO75444 373 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 AHCYP23526 432 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CXCR1P25024 350 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GRM5P41594 1212 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 AIF1P55008 147 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CDH4P55283 916 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TRAP1Q12931 704 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 N4BP2L1Q5TBK1 243 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 TPGS2Q68CL5 300 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 NIPAL1Q6NVV3 410 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 DNM1P34Q6PK57 102 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GPRIN3Q6ZVF9 776 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MOB2Q70IA6 237 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SATL1Q86VE3 508 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GPALPP1Q8IXQ4 340 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CFAP52Q8N1V2 620 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 FAM26EQ8N5C1 309 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PNLDC1Q8NA58 520 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 TTLQ8NG68 377 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SEMA4DQ92854 862 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 POP5Q969H6 163 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 GPATCH1Q9BRR8 931 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 LRRC1Q9BTT6 524 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CARS2Q9HA77 564 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 SALL1Q9NSC2 1324 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TCRBV21S2A2A0A5A6 115 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SLC38A8A6NNN8 435 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ZNF879B4DU55 563 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PSMD9O00233 223 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CDC40O60508 579 aaKnown RBP eCLIP5.68□□□□□ -1.5
HERC4-206ENST00000427635 GZMAP12544 262 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GJA1P17302 382 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PRKAR1BP31321 381 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 RPL22P35268 128 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 HOXD12P35452 270 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 KCNJ1P48048 391 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CDK7P50613 346 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TAF10Q12962 218 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ABCA11PQ4W5N1 156 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TMPRSS11AQ6ZMR5 421 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MAP4K3Q8IVH8 894 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 HORMAD2Q8N7B1 307 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PLPP7Q8NBV4 271 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 OR6K2Q8NGY2 324 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TAS1R2Q8TE23 839 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TATDN2Q93075 761 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MYDGFQ969H8 173 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ZDHHC12Q96GR4 267 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 VCPIP1Q96JH7 1222 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 RNF145Q96MT1 663 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 PTGES2Q9H7Z7 377 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 EIF3KQ9UBQ5 218 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 IKZF3Q9UKT9 509 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 RUVBL1Q9Y265 456 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 DHRS7Q9Y394 339 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ZNF609O15014 1411 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 EDDM13A0A1B0GTR0 161 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 CIB4A0PJX0 185 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 M0R129 80 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ASNA1O43681 348 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SULT1B1O43704 296 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MDH1P40925 334 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 GALK1P51570 392 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 SRP54P61011 504 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 CACNG1Q06432 222 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 GRB10Q13322 594 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 DUSP28Q4G0W2 176 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 HGSNATQ68CP4 663 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 NEPROQ6NW34 567 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 MED27Q6P2C8 311 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ZBTB49Q6ZSB9 765 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CHERPQ8IWX8 916 aaKnown RBP5.68□□□□□ -1.5
HERC4-206ENST00000427635 COX18Q8N8Q8 333 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 DDHD1Q8NEL9 900 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 RORBQ92753 470 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 KLHDC7BQ96G42 594 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 UCN2Q96RP3 112 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 TMEM175Q9BSA9 504 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 CRB3Q9BUF7 120 aa5.68□□□□□ -1.5
HERC4-206ENST00000427635 ABCG8Q9H221 673 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms