RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CCDC154A6NI56 674 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CENPXA8MT69 81 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CD36P16671 472 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 AZGP1P25311 298 aaKnown RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 HTR2BP41595 481 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 SERPINB10P48595 397 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 SLC26A2P50443 739 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 CCSAPQ6IQ19 270 aaPredicted RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 KIAA1841Q6NSI8 718 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 NIPA1Q7RTP0 329 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 DTWD1Q8N5C7 304 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF555Q8NEP9 628 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 TTC9Q92623 222 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 ATG4CQ96DT6 458 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 ACOX2Q99424 681 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 BARD1Q99728 777 aaKnown RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 BCO2Q9BYV7 579 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 DEFB129Q9H1M3 183 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 RPF1Q9H9Y2 349 aaKnown RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 SEMA4BQ9NPR2 832 aaPredicted RBP11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 TOR4AQ9NXH8 423 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 ABCD2Q9UBJ2 740 aa11.19□□□□□ -0.62
SEC61A1-202ENST00000424880 KRT87PA6NCN2 255 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 H0YCG3 227 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PMPCBO75439 489 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 GPIP06744 558 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PFKLP17858 780 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 NDUFV1P49821 464 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SULT1E1P49888 294 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 CBX2Q14781 532 aaPredicted RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PXDC1Q5TGL8 231 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RGMBQ6NW40 437 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 DEFB106AQ8N104 65 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PARP16Q8N5Y8 322 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 ITFG1Q8TB96 612 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 ROPN1LQ96C74 230 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 NSMCE2Q96MF7 247 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SNX18Q96RF0 628 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 DCSTAMPQ9H295 470 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 TUBB1Q9H4B7 451 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RPRD1BQ9NQG5 326 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RNF146Q9NTX7 359 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 UCKL1Q9NWZ5 548 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 TSR3Q9UJK0 312 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 INTS6Q9UL03 887 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 LOC100130705A0A1B0GUX0 176 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 EFCAB9A8MZ26 197 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 DIRAS1O95057 198 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 GABARAPO95166 117 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 ANGPTL1O95841 491 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 C1RP00736 705 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 MT-ND2P03891 347 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 HSD17B1P14061 328 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PRDX3P30048 256 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 LAMTOR4Q0VGL1 99 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 CLCA4Q14CN2 919 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PFKFB4Q16877 469 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 BCL7AQ4VC05 210 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 TWF2Q6IBS0 349 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SULT1C3Q6IMI6 304 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 NRARPQ7Z6K4 114 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SLC51BQ86UW2 128 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 IL17RDQ8NFM7 739 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 OR5H6Q8NGV6 325 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 HOPXQ9BPY8 73 aaPredicted RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 MRPL57Q9BQC6 102 aaKnown RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 B3GNT4Q9C0J1 378 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 GSTO2Q9H4Y5 243 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 IGSF5Q9NSI5 407 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 MGAMO43451 1857 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SBF1O95248 1867 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 OR51F1A6NGY5 319 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 C12orf71A8MTZ7 269 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 DFFAO00273 331 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 NPHS1O60500 1241 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 CAPN1P07384 714 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SUPT20HL2P0C7V6 817 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 ISL1P61371 349 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 CD83Q01151 205 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 MVKQ03426 396 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SLAMF1Q13291 335 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 TAB1Q15750 504 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 SUPT20HL1Q3ZLR7 823 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 ATF7IP2Q5U623 682 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 CES5AQ6NT32 575 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 TWIST2Q8WVJ9 160 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 PMEPA1Q969W9 287 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 NT5C1AQ9BXI3 368 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RHOBTB2Q9BYZ6 727 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RIBC2Q9H4K1 309 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 RANGRFQ9HD47 186 aaPredicted RBP11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 OPTCQ9UBM4 332 aa11.18□□□□□ -0.62
SEC61A1-202ENST00000424880 USP3Q9Y6I4 520 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms