RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 B3GALT1Q9Y5Z6 326 aa14.96□□□□□ -0.01
USB1-202ENST00000423271 OR5K4A6NMS3 321 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 EFCAB7A8K855 629 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 PDZK1P1A8MUH7 402 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 GAPDHSO14556 408 aaPredicted RBP14.95□□□□□ -0.02
USB1-202ENST00000423271 VEGFDO43915 354 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A9O60656 530 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 AGTP01019 485 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 BRAFP15056 766 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A6P19224 532 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A1P22309 533 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A4P22310 534 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 CD82P27701 267 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A3P35503 534 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 CETN2P41208 172 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 TNNT3P45378 269 aaPredicted RBP14.95□□□□□ -0.02
USB1-202ENST00000423271 EPHA4P54764 986 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 TMEM115Q12893 351 aaPredicted RBP14.95□□□□□ -0.02
USB1-202ENST00000423271 LY6DQ14210 128 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 RPS6KA1Q15418 735 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 MANEAQ5SRI9 462 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 TMEM164Q5U3C3 297 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 WDR74Q6RFH5 385 aaPredicted RBP14.95□□□□□ -0.02
USB1-202ENST00000423271 C11orf96Q7Z7L8 435 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 FAM129CQ86XR2 697 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 TRAPPC5Q8IUR0 188 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 ZNF843Q8N446 348 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 GDAP1Q8TB36 358 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 NCSTNQ92542 709 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 SH3KBP1Q96B97 665 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 TAAR9Q96RI9 348 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 APOL2Q9BQE5 337 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 FSD1LQ9BXM9 530 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 B3GNT4Q9C0J1 378 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A7Q9HAW7 530 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A10Q9HAW8 530 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 UGT1A8Q9HAW9 530 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 HACD3Q9P035 362 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 ZNF624Q9P2J8 865 aaPredicted RBP14.95□□□□□ -0.02
USB1-202ENST00000423271 KLHL3Q9UH77 587 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 EFR3BQ9Y2G0 817 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 PCDHGA3Q9Y5H0 932 aa14.95□□□□□ -0.02
USB1-202ENST00000423271 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.95□□□□□ -0.02
USB1-202ENST00000423271 GLYATL1P3A0A0U1RQE8 302 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 LILRA5A6NI73 299 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 USP27XA6NNY8 438 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 RBP3P10745 1247 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 RPL10P27635 214 aaKnown RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 PSMB4P28070 264 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 SLC19A1P41440 591 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 CTSCP53634 463 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 DRG2P55039 364 aaKnown RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 GEMP55040 296 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 EIF3EP60228 445 aaKnown RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 C19orf57Q0VDD7 668 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 ANKS6Q68DC2 871 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 ARHGAP22Q7Z5H3 698 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 CDKL3Q8IVW4 592 aaPredicted RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 BMPERQ8N8U9 685 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 UBE2Q2Q8WVN8 375 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 SLC39A1Q9NY26 324 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 OGFRQ9NZT2 677 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 ARL5AQ9Y689 179 aa14.94□□□□□ -0.02
USB1-202ENST00000423271 ZNF106Q9H2Y7 1883 aaKnown RBP14.94□□□□□ -0.02
USB1-202ENST00000423271 OR52A4PA6NMU1 304 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 B4E171 279 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 STMND1H3BQB6 276 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 KCNN4O15554 427 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 ANXA9O76027 345 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 XRCC1P18887 633 aaPredicted RBP14.93□□□□□ -0.02
USB1-202ENST00000423271 ADRA1AP35348 466 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 TSPAN7P41732 249 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 GFERP55789 205 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 GTF2H3Q13889 308 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 ANKRD20A2Q5SQ80 823 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 GPRC6AQ5T6X5 926 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 ANKRD20A1Q5TYW2 823 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 ANKRD20A3Q5VUR7 823 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 ZDHHC20Q5W0Z9 365 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 ITPRIPL1Q6GPH6 555 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 TMEM26Q6ZUK4 368 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 TRIM48Q8IWZ4 208 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 RASGEF1AQ8N9B8 481 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 DDHD1Q8NEL9 900 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 CCDC110Q8TBZ0 833 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 SGF29Q96ES7 293 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 WBP1Q96G27 269 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 CTRCQ99895 268 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 DDA1Q9BW61 102 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 TLR10Q9BXR5 811 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 WDR37Q9Y2I8 494 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 PKP3Q9Y446 797 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 KCTD3Q9Y597 815 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 PCDHB11Q9Y5F2 797 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 SLC30A1Q9Y6M5 507 aa14.93□□□□□ -0.02
USB1-202ENST00000423271 MN1Q10571 1320 aaPredicted RBP14.92□□□□□ -0.02
USB1-202ENST00000423271 TCRBV7S2A1N4TA0A589 114 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms