RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MBTD1Q05BQ5 628 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 MVPQ14764 893 aaKnown RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 NAB2Q15742 525 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 TBCEQ15813 527 aaPredicted RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 DUOXA1Q1HG43 343 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 PCGF3Q3KNV8 242 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 NCEH1Q6PIU2 408 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 TPRG1Q6ZUI0 275 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 HIST3H2AQ7L7L0 130 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 LONP2Q86WA8 852 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 GBGT1Q8N5D6 347 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 NAXEQ8NCW5 288 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 SMPDL3BQ92485 455 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 ARHGEF2Q92974 986 aaKnown RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 SENP5Q96HI0 755 aaPredicted RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 PPM1MQ96MI6 270 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 FSD1Q9BTV5 496 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 MOV10L1Q9BXT6 1211 aaKnown RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 SLC52A3Q9NQ40 469 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 LIMA1Q9UHB6 759 aaKnown RBP3.69□□□□□ -1.82
LINC00397-201ENST00000422074 YIPF1Q9Y548 306 aa3.69□□□□□ -1.82
LINC00397-201ENST00000422074 COL2A1P02458 1487 aaPredicted RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 FAM237BA0A1B0GVD1 139 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 CIDEAO60543 219 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 ZNF217O75362 1048 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 WDHD1O75717 1129 aaPredicted RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 DDX58O95786 925 aaKnown RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 KRT5P13647 590 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 NR2F2P24468 414 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 RPS3AP61247 264 aaKnown RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 SPOCK1Q08629 439 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 LRMPQ12912 555 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 TSTQ16762 297 aaKnown RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 C15orf39Q6ZRI6 1047 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 MYPOPQ86VE0 399 aaPredicted RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 C1orf52Q8N6N3 182 aaKnown RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 FRMD1Q8N878 549 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 MAPK1IP1LQ8NDC0 245 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 WDR20Q8TBZ3 569 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 ZNF473Q8WTR7 871 aaKnown RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 C7orf26Q96N11 449 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 APOBEC3GQ9HC16 384 aaKnown RBP3.68□□□□□ -1.82
LINC00397-201ENST00000422074 TRPC7Q9HCX4 862 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 EHD2Q9NZN4 543 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 C2CD2Q9Y426 696 aa3.68□□□□□ -1.82
LINC00397-201ENST00000422074 A0A0G2JLW4 131 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 OR2M5A3KFT3 312 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 LIPT2A6NK58 231 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 HHLA1C9JL84 531 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 SLC22A2O15244 555 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 TMCC2O75069 709 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 CAVIN2O95810 425 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 IGLV1-44P01699 117 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 CD48P09326 243 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 RGS19P49795 217 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 MMP15P51511 669 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 GPR143P51810 404 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 GOLGA8DPQ0D2H9 430 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 GAGE2BQ13066 116 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 GAGE2EQ4V326 116 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 JAKMIP3Q5VZ66 844 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 JADE1Q6IE81 842 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 GAGE2AQ6NT46 116 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 TMTC3Q6ZXV5 915 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 ZNF534Q76KX8 674 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 CEP97Q8IW35 865 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 ZNF485Q8NCK3 441 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 OR8K5Q8NH50 307 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 PPP4R1Q8TF05 950 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 OXNAD1Q96HP4 312 aaPredicted RBP3.67□□□□□ -1.82
LINC00397-201ENST00000422074 MUC13Q9H3R2 512 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 UNC45AQ9H3U1 944 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 GAGE2DQ9UEU5 116 aa3.67□□□□□ -1.82
LINC00397-201ENST00000422074 TDRD9Q8NDG6 1382 aaKnown RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 IGKV3D-15A0A087WSY6 115 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 A0A087X002 238 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 TEX13DA0A0J9YY54 714 aaPredicted RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 TMEM8BA6NDV4 472 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 PSMD14O00487 310 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 PLPP2O43688 288 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 LIPFP07098 398 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 HSPA1AP0DMV8 641 aaKnown RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 HSPA1BP0DMV9 641 aaKnown RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 ACTN1P12814 892 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 ZNF26P17031 533 aaPredicted RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 TAF6P49848 677 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 G3BP1Q13283 466 aaKnown RBP eCLIP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 ASPRV1Q53RT3 343 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 RARS2Q5T160 578 aaKnown RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 CCDC190Q86UF4 302 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 HJURPQ8NCD3 748 aaPredicted RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 KCNG4Q8TDN1 519 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 EVI5LQ96CN4 794 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 OR2A14Q96R47 310 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 SLC22A12Q96S37 553 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 SMC6Q96SB8 1091 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 BICC1Q9H694 974 aaKnown RBP3.66□□□□□ -1.82
LINC00397-201ENST00000422074 TSPYL4Q9UJ04 414 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 KCNK7Q9Y2U2 307 aa3.66□□□□□ -1.82
LINC00397-201ENST00000422074 JRKLQ9Y4A0 524 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms