RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 EFHC1Q5JVL4 640 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 FAM180BQ6P0A1 224 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 C8orf82Q6P1X6 216 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 ZNF530Q6P9A1 599 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 FBXO46Q6PJ61 603 aaPredicted RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 TSSK4Q6SA08 328 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 CCDC129Q6ZRS4 1044 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 STOX1Q6ZVD7 989 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 NEK10Q6ZWH5 1172 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 LINGO2Q7L985 606 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 FJX1Q86VR8 437 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SLC35F3Q8IY50 421 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ZBTB2Q8N680 514 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 IQCF1Q8N6M8 205 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 PDILTQ8N807 584 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TC2NQ8N9U0 490 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ANKRD20A12PQ8NF67 263 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ADAMTS15Q8TE58 950 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 AFAP1L1Q8TED9 768 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ADAMTS14Q8WXS8 1223 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 FAM149B1Q96BN6 582 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 DHX58Q96C10 678 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 INTS12Q96CB8 462 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 LYZL4Q96KX0 146 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TCEANC2Q96MN5 208 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 LRFN5Q96NI6 719 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SLC25A33Q9BSK2 321 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TMEM204Q9BSN7 226 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 WACQ9BTA9 647 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SEZ6LQ9BYH1 1024 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 SIL1Q9H173 461 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 HSD3B7Q9H2F3 369 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ANKZF1Q9H8Y5 726 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 KIF9Q9HAQ2 790 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 DDX4Q9NQI0 724 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 ASAH2Q9NR71 780 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 ZNHIT6Q9NWK9 470 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 PAG1Q9NWQ8 432 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 WNT16Q9UBV4 365 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 LIMA1Q9UHB6 759 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 HAO1Q9UJM8 370 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 DBNLQ9UJU6 430 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 AGO1Q9UL18 857 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 MKLN1Q9UL63 735 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 PA2G4Q9UQ80 394 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 SLC45A1Q9Y2W3 748 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 AAR2Q9Y312 384 aaKnown RBP2.69□□□□□ -1.98
VPS41-206ENST00000418457 CAPN7Q9Y6W3 813 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 RGPD2P0DJD1 1756 aa2.69□□□□□ -1.98
VPS41-206ENST00000418457 TIAM2Q8IVF5 1701 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 XIRP1Q702N8 1843 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 MYH6P13533 1939 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 MYH8P13535 1937 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 MYH13Q9UKX3 1938 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KLF18A0A0U1RQI7 1052 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 LINC01553A4QN01 128 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 TMEM202A6NGA9 273 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 LACTBL1A8MY62 500 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 GOLGA8KD6RF30 607 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 H3BQF6 201 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 J3KR12 359 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 PSMD14O00487 310 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 CLGNO14967 610 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 HSPA12AO43301 675 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KRT86O43790 486 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 PAGE4O60829 102 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KCNJ13O60928 360 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KIAA0754O94854 1291 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 ERLIN2O94905 339 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 IPO7O95373 1038 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 CH25HO95992 272 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 NGFRP08138 427 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 KRT10P13645 584 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 CALRP27797 417 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 ARL3P36405 182 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 PPP1R2P41236 205 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 THBS3P49746 956 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 METAP2P50579 478 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS41-206ENST00000418457 GSCP56915 257 aaPredicted RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 GEMIN4P57678 1058 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 KRT83P78385 493 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 SORDQ00796 357 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 EGR4Q05215 589 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 DDR1Q08345 913 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 GOLGA8DPQ0D2H9 430 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 TFCP2Q12800 502 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 DRP2Q13474 957 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 NAE1Q13564 534 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 FRG1Q14331 258 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 DRAP1Q14919 205 aaPredicted RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 PLCB4Q15147 1175 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 HLFQ16534 295 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 ALG11Q2TAA5 492 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 COL28A1Q2UY09 1125 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 MMEL1Q495T6 779 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 SPATA1Q5VX52 437 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 HAUS3Q68CZ6 603 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 LRRC31Q6UY01 552 aa2.68□□□□□ -1.98
VPS41-206ENST00000418457 ZC3HC1Q86WB0 502 aaKnown RBP2.68□□□□□ -1.98
VPS41-206ENST00000418457 ZDHHC17Q8IUH5 632 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms