RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 PACS2Q86VP3 889 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GNEQ9Y223 722 aaKnown RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 PCDHGA3Q9Y5H0 932 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 DLG5Q8TDM6 1919 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 CPSF4LA6NMK7 179 aaKnown RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 EPHB6O15197 1021 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 AMIGO1Q86WK6 493 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 RIT1Q92963 219 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 HAVCR1Q96D42 359 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 C12orf66Q96MD2 445 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 KCTD15Q96SI1 283 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 RHOJQ9H4E5 214 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 UBR1Q8IWV7 1749 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 TCRBV9S1A1TA0A576 114 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 TRIM38O00635 465 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 KERAO60938 352 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 QPRTQ15274 297 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 MAPK14Q16539 360 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 BMT2Q1RMZ1 405 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 SNX33Q8WV41 574 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 DHRS1Q96LJ7 313 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 PCBD2Q9H0N5 130 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 NOL11Q9H8H0 719 aaKnown RBP11.12□□□□□ -0.63
PTCH1-205ENST00000418258 NR2E1Q9Y466 385 aa11.12□□□□□ -0.63
PTCH1-205ENST00000418258 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 A0A0X1KG70 313 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SLC38A8A6NNN8 435 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 TPST2O60704 377 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SERPINA6P08185 405 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PKMP14618 531 aaKnown RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 AGXTP21549 392 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 FSHRP23945 695 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 GDI1P31150 447 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 GABRB2P47870 512 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CYP4F8P98187 520 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PRSS55Q6UWB4 352 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 FBXW8Q8N3Y1 598 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 RCN3Q96D15 328 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ZHX1-C8orf76Q96EF9 292 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ANKRD27Q96NW4 1050 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 EBPLQ9BY08 206 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 IL36AQ9UHA7 158 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 A8MU76 341 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 B4DGG1 531 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 STK16O75716 305 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PSMG1O95456 288 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SLC26A3P40879 764 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 MARCKSL1P49006 195 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 POLR2JP52435 117 aaKnown RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 NRG3P56975 720 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 GMFBP60983 142 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 DSC2Q02487 901 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CMC1Q7Z7K0 106 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 COX18Q8N8Q8 333 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 UBAP1Q9NZ09 502 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 A0A075B6Q4 140 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 MT-CYBP00156 380 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 TNFP01375 233 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 RTP1P59025 263 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 C1QTNF8P60827 252 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PPP3R1P63098 170 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 MC1RQ01726 317 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 RANBP3LQ86VV4 465 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 LNX1Q8TBB1 728 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CSPG4P5Q96PW8 444 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 NCANO14594 1321 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 C9P02748 559 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 RHOQP17081 205 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 KIR3DL1P43629 444 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 HSPA7P48741 367 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ENPP7Q6UWV6 458 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CUZD1Q86UP6 607 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ALYREFQ86V81 257 aaKnown RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 KBTBD8Q8NFY9 601 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 C1GALT1C1Q96EU7 318 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 GPR21Q99679 349 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SLC8B1Q6J4K2 584 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 OR4C6Q8NH72 309 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PPM1MQ96MI6 270 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 TDRD1Q9BXT4 1180 aaKnown RBP11.11□□□□□ -0.63
PTCH1-205ENST00000418258 LRRC19Q9H756 370 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 MOCS1Q9NZB8 636 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PCDHGC4Q9Y5F7 938 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 TSPAN1O60635 241 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CD247P20963 164 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 RYKP34925 604 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ADRA1BP35368 520 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PRKCIP41743 596 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 MEA1Q16626 185 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 LIX1Q8N485 282 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ACBD6Q9BR61 282 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 PDZD7Q9H5P4 517 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
PTCH1-205ENST00000418258 ANXA4P09525 319 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-205ENST00000418258 ENPEPQ07075 957 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms