RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PAHP00439 452 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 SBK3P0C264 359 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MLNP12872 115 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 IL1R1P14778 569 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ARSAP15289 507 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TCF3P15923 654 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CD36P16671 472 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 DDCP20711 480 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PIGAP37287 484 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ETV6P41212 452 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 HNF4AP41235 474 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 GZMKP49863 264 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 UGT2B15P54855 530 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CDH6P55285 790 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ISL1P61371 349 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 BTBD16Q32M84 506 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 HSDL1Q3SXM5 330 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 SPANXN2Q5MJ10 180 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 RBM20Q5T481 1227 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 RAP1GAP2Q684P5 730 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 GLYATQ6IB77 296 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TXNDC11Q6PKC3 985 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 HDDC2Q7Z4H3 204 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PRSS42Q7Z5A4 293 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 STRA8Q7Z7C7 330 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 STK32CQ86UX6 486 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MICU2Q8IYU8 434 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TMEM151AQ8N4L1 468 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CPA6Q8N4T0 437 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 EMC1Q8N766 993 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PLD5Q8N7P1 536 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 FNDC5Q8NAU1 212 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZMIZ2Q8NF64 920 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 OR10T2Q8NGX3 314 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 VANGL1Q8TAA9 524 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 BLOC1S5Q8TDH9 187 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 BPIFB1Q8TDL5 484 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 BCL7CQ8WUZ0 217 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 NCLNQ969V3 563 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TMBIM1Q969X1 311 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TESCQ96BS2 214 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 CPB2Q96IY4 423 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 OR2A14Q96R47 310 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 SEPHS2Q99611 448 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TRAF4Q9BUZ4 470 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 WDR18Q9BV38 432 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 BEX2Q9BXY8 128 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 AMBRA1Q9C0C7 1298 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF518BQ9C0D4 1074 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MEAF6Q9HAF1 191 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MCCC2Q9HCC0 563 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 NGRNQ9NPE2 291 aaKnown RBP6.33□□□□□ -1.4
CCNT1-202ENST00000417344 C14orf119Q9NWQ9 140 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 GTSE1Q9NYZ3 720 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ERVK-18Q9QC07 812 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TBX20Q9UMR3 447 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 USP18Q9UMW8 372 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 USP22Q9UPT9 525 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 MAN2B2Q9Y2E5 1009 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ANKRD6Q9Y2G4 727 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF175Q9Y473 711 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 PEX16Q9Y5Y5 336 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 AUP1Q9Y679 476 aa6.33□□□□□ -1.4
CCNT1-202ENST00000417344 TNRC6CQ9HCJ0 1690 aaKnown RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 E5RI56 91 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 H0YC42 278 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 UPK1AO00322 258 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 EEF2KO00418 725 aaKnown RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 STX7O15400 261 aaKnown RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 AKR7A2O43488 359 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 NPHS1O60500 1241 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 PLA2G6O60733 806 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 OR2B3O76000 313 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 ENDOD1O94919 500 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 MAP3K6O95382 1288 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 NTSR2O95665 410 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 FTH1P02794 183 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 HOXD4P09016 255 aaPredicted RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 ZNF250P15622 560 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 NCK1P16333 377 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 CYP3A5P20815 502 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 SLC6A2P23975 617 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 MGAT1P26572 445 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 TGFBR2P37173 567 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 RFX2P48378 723 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 NPY2RP49146 381 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 SLC12A2P55011 1212 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 SESN2P58004 480 aaPredicted RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 GPR85P60893 370 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 SNRPD2P62316 118 aaKnown RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 POLR2GP62487 172 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 TEKQ02763 1124 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 MVKQ03426 396 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 COX10Q12887 443 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 CAPRIN1Q14444 709 aaKnown RBP6.32□□□□□ -1.4
CCNT1-202ENST00000417344 NFE2L1Q14494 772 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 TAF12Q16514 161 aa6.32□□□□□ -1.4
CCNT1-202ENST00000417344 ZACNQ401N2 412 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms