RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZCCHC2Q9C0B9 1178 aaKnown RBP24.93■■□□□ 1.58
VEGFA-208ENST00000417285 LACRTQ9GZZ8 138 aa24.93■■□□□ 1.58
VEGFA-208ENST00000417285 SCHIP1Q9P0W5 487 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-208ENST00000417285 ZNF624Q9P2J8 865 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-208ENST00000417285 TMPRSS11EQ9UL52 423 aa24.93■■□□□ 1.58
VEGFA-208ENST00000417285 DNAJC16Q9Y2G8 782 aa24.93■■□□□ 1.58
VEGFA-208ENST00000417285 PKP3Q9Y446 797 aa24.93■■□□□ 1.58
VEGFA-208ENST00000417285 MACROD2A1Z1Q3 448 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 PDZK1P1A8MUH7 402 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 TOX3O15405 576 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-208ENST00000417285 CAPN5O15484 640 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-208ENST00000417285 MTX2O75431 263 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 ANXA9O76027 345 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 RBL1P28749 1068 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 SPAM1P38567 509 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 SLC19A1P41440 591 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 LDLRAP1Q5SW96 308 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 ANKS6Q68DC2 871 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 ITPRIPL1Q6GPH6 555 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 CDKL3Q8IVW4 592 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-208ENST00000417285 CACNA2D3Q8IZS8 1091 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 EXD3Q8N9H8 876 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 PMEPA1Q969W9 287 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 FSD1LQ9BXM9 530 aa24.92■■□□□ 1.58
VEGFA-208ENST00000417285 DNMT3AQ9Y6K1 912 aaPredicted RBP24.92■■□□□ 1.58
VEGFA-208ENST00000417285 TLN1Q9Y490 2541 aaKnown RBP24.91■■□□□ 1.58
VEGFA-208ENST00000417285 UBXN7O94888 489 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 ANKRD34CP0C6C1 535 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 AMD1P17707 334 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 MAP4P27816 1152 aaKnown RBP24.91■■□□□ 1.58
VEGFA-208ENST00000417285 OTUD4Q01804 1114 aaKnown RBP24.91■■□□□ 1.58
VEGFA-208ENST00000417285 PLA2G4EQ3MJ16 856 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 KHDC1Q4VXA5 237 aaKnown RBP24.91■■□□□ 1.58
VEGFA-208ENST00000417285 GLT6D1Q7Z4J2 308 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 TRAPPC5Q8IUR0 188 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 ACTL9Q8TC94 416 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 BLOC1S5Q8TDH9 187 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 EXTL1Q92935 676 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 SPRY4Q9C004 299 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 GBA3Q9H227 469 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 POT1Q9NUX5 634 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 PILRAQ9UKJ1 303 aa24.91■■□□□ 1.58
VEGFA-208ENST00000417285 MN1Q10571 1320 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-208ENST00000417285 TENM4Q6N022 2769 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 RAD1O60671 282 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 C9P02748 559 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 WT1P19544 449 aaPredicted RBP24.9■■□□□ 1.58
VEGFA-208ENST00000417285 CHRNA4P43681 627 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 GEMP55040 296 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 ITGA9Q13797 1035 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 TBR1Q16650 682 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 C11orf96Q7Z7L8 435 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 AMZ2Q86W34 360 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 LRRC57Q8N9N7 239 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 CXorf40BQ96DE9 158 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 RTP4Q96DX8 246 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 C9orf72Q96LT7 481 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 TRIT1Q9H3H1 467 aaKnown RBP24.9■■□□□ 1.58
VEGFA-208ENST00000417285 SLC40A1Q9NP59 571 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 IMPACTQ9P2X3 320 aa24.9■■□□□ 1.58
VEGFA-208ENST00000417285 BOD1L1Q8NFC6 3051 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 GLYATL1P3A0A0U1RQE8 302 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 GRID2IPA4D2P6 1211 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 J3QKU1 62 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 POLR1CO15160 346 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-208ENST00000417285 STK10O94804 968 aaKnown RBP24.89■■□□□ 1.58
VEGFA-208ENST00000417285 TJP3O95049 919 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 BRAFP15056 766 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 RPL10P27635 214 aaKnown RBP24.89■■□□□ 1.58
VEGFA-208ENST00000417285 HALP42357 657 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 EIF3EP60228 445 aaKnown RBP24.89■■□□□ 1.58
VEGFA-208ENST00000417285 CHRNA6Q15825 494 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 SYCE1Q8N0S2 351 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 ZNF514Q96K75 400 aaPredicted RBP24.89■■□□□ 1.58
VEGFA-208ENST00000417285 EFHD1Q9BUP0 239 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 SLC12A9Q9BXP2 914 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 C10orf88Q9H8K7 445 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 KLHL3Q9UH77 587 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 AMFRQ9UKV5 643 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 SLC30A1Q9Y6M5 507 aa24.89■■□□□ 1.58
VEGFA-208ENST00000417285 STX7O15400 261 aaKnown RBP24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UGT1A9O60656 530 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 ZNF189O75820 626 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-208ENST00000417285 RBP3P10745 1247 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UGT1A6P19224 532 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UGT1A1P22309 533 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UGT1A4P22310 534 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 CDC25BP30305 580 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 KIF5AQ12840 1032 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 SEPT7Q16181 437 aaKnown RBP24.88■■□□□ 1.57
VEGFA-208ENST00000417285 DARS2Q6PI48 645 aaKnown RBP24.88■■□□□ 1.57
VEGFA-208ENST00000417285 FAM151BQ6UXP7 276 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 NLGN4XQ8N0W4 816 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UBL4BQ8N7F7 174 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 DDHD1Q8NEL9 900 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 NLGN4YQ8NFZ3 816 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-208ENST00000417285 KIAA1143Q96AT1 154 aaPredicted RBP24.88■■□□□ 1.57
VEGFA-208ENST00000417285 CTRCQ99895 268 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UGT1A7Q9HAW7 530 aa24.88■■□□□ 1.57
VEGFA-208ENST00000417285 UGT1A10Q9HAW8 530 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms