RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DKK1O94907 266 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 MYF5P13349 255 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 NSG1P42857 185 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 CTSCP53634 463 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 CALCOCO2Q13137 446 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 BIRC2Q13490 618 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 DBN1Q16643 649 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 PLA2G4EQ3MJ16 856 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 BCL7AQ4VC05 210 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 PNPLA1Q8N8W4 532 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 IFI44Q8TCB0 444 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 ADAMTS14Q8WXS8 1223 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 SIGLEC10Q96LC7 697 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 NAT9Q9BTE0 207 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 OSGEPL1Q9H4B0 414 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 VPS37BQ9H9H4 285 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 SLC23A2Q9UGH3 650 aa22.74■■□□□ 1.23
SMARCB1-205ENST00000417137 CACNA1BQ00975 2339 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 OR5K4A6NMS3 321 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 QSOX1O00391 747 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 PFDN6O15212 129 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 CD3EAPO15446 510 aaKnown RBP22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 SNX2O60749 519 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 AP2A2O94973 939 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 VAPBO95292 243 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 PRSS56P0CW18 603 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 IDSP22304 550 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 RPL21P46778 160 aaKnown RBP22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 B4GALNT1Q00973 533 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 ANKRD20A4Q4UJ75 823 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 KIAA0930Q6ICG6 404 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 CES3Q6UWW8 571 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 EFL1Q7Z2Z2 1120 aaKnown RBP22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 C11orf96Q7Z7L8 435 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 SDCCAG8Q86SQ7 713 aaPredicted RBP22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 TMEM135Q86UB9 458 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 STAMBPL1Q96FJ0 436 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 ABCG4Q9H172 646 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 WHRNQ9P202 907 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 DNAJC16Q9Y2G8 782 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 RPS6KL1Q9Y6S9 549 aa22.73■■□□□ 1.23
SMARCB1-205ENST00000417137 ZW10O43264 779 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 POLBP06746 335 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 ADRB1P08588 477 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 GLB1P16278 677 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 PMLP29590 882 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 TTPAP49638 278 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 ARL4CP56559 192 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 MRPS25P82663 173 aaKnown RBP22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 HLTFQ14527 1009 aaKnown RBP eCLIP22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 MRNIPQ6NTE8 343 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 GUSBP11Q6P575 273 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 PACS1Q6VY07 963 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 C17orf82Q86X59 251 aaPredicted RBP22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 CCNJLQ8IV13 435 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 NAGSQ8N159 534 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 LINC00615Q96LM1 132 aaPredicted RBP22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 TBC1D29Q9UFV1 150 aa22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 TPRP12270 2363 aaKnown RBP22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 ARID1BQ8NFD5 2236 aaPredicted RBP22.72■■□□□ 1.23
SMARCB1-205ENST00000417137 CTAGE15A4D2H0 777 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 MGAT4DA6NG13 374 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 NUDT21O43809 227 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 USP1O94782 785 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 GSTM1P09488 218 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 CTAGE8P0CG41 777 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 F3P13726 295 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 PNLIPP16233 465 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 PRLHRP49683 370 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 GSTM4Q03013 218 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 DMPKQ09013 629 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 HIF1AQ16665 826 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 BBS9Q3SYG4 887 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 C8orf74Q6P047 294 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 IYDQ6PHW0 289 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 CTAGE6Q86UF2 777 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 CTAGE4Q8IX94 777 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 ARL14Q8N4G2 192 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 OTUD6BQ8N6M0 293 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 AVL9Q8NBF6 648 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 OR2L2Q8NH16 312 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 MAPK15Q8TD08 544 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 ZNF669Q96BR6 464 aaPredicted RBP22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 LRRC39Q96DD0 335 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 DPH5Q9H2P9 285 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 STN1Q9H668 368 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 LRIT1Q9P2V4 623 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 ACACBO00763 2458 aa22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 ZNF106Q9H2Y7 1883 aaKnown RBP22.71■■□□□ 1.23
SMARCB1-205ENST00000417137 CNOT1A5YKK6 2376 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 KIR2DS5A0A0G2JLQ3 304 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 A0A0G2JNG1 304 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 C17orf113A0A1B0GUU1 675 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 RHPN2P1A8MT19 583 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 PDZK1P1A8MUH7 402 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 KIR2DS3K7RE56 304 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 TTC4O95801 387 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 PGAM1P18669 254 aa22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 DHX9Q08211 1270 aaKnown RBP22.7■■□□□ 1.22
SMARCB1-205ENST00000417137 KIR2DS5Q14953 304 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms