RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 SLC30A1Q9Y6M5 507 aa17.59■□□□□ 0.41
CPNE1-210ENST00000416778 HELZ2Q9BYK8 2649 aaKnown RBP17.58■□□□□ 0.41
CPNE1-210ENST00000416778 GLYATL1P3A0A0U1RQE8 302 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 POP7O75817 140 aaKnown RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 TJP3O95049 919 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 VIPP01282 170 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 WT1P19544 449 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 IDSP22304 550 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 RPL10P27635 214 aaKnown RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 CLCA4Q14CN2 919 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 PLA2G4EQ3MJ16 856 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 MANEAQ5SRI9 462 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 ITPRIPL1Q6GPH6 555 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 DARS2Q6PI48 645 aaKnown RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 FAM151BQ6UXP7 276 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 TMEM26Q6ZUK4 368 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 GLT6D1Q7Z4J2 308 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 GDAP1Q8TB36 358 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 ZNF398Q8TD17 642 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 SGF29Q96ES7 293 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 FAM118BQ9BPY3 351 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 FICDQ9BVA6 458 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 ASPSCR1Q9BZE9 553 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 SLC40A1Q9NP59 571 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 FBXO8Q9NRD0 319 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 WDR37Q9Y2I8 494 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 AAR2Q9Y312 384 aaKnown RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 PKP3Q9Y446 797 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 ARL5AQ9Y689 179 aa17.58■□□□□ 0.4
CPNE1-210ENST00000416778 DNMT3AQ9Y6K1 912 aaPredicted RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 ZFC3H1O60293 1989 aaKnown RBP17.58■□□□□ 0.4
CPNE1-210ENST00000416778 LILRA5A6NI73 299 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 STMND1H3BQB6 276 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 STX7O15400 261 aaKnown RBP17.57■□□□□ 0.4
CPNE1-210ENST00000416778 KCNN4O15554 427 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 LPOP22079 712 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-210ENST00000416778 PPM1FP49593 454 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-210ENST00000416778 CTSCP53634 463 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 OLIG2Q13516 323 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 LY6DQ14210 128 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 TAF1AQ15573 450 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-210ENST00000416778 LDLRAP1Q5SW96 308 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 DCAF12Q5T6F0 453 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 DENND5AQ6IQ26 1287 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 TMEM220Q6QAJ8 160 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 VASH2Q86V25 355 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 PLXDC1Q8IUK5 500 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 CDKL3Q8IVW4 592 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-210ENST00000416778 CCDC112Q8NEF3 446 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 JPH3Q8WXH2 748 aaPredicted RBP17.57■□□□□ 0.4
CPNE1-210ENST00000416778 TTC25Q96NG3 672 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 FERMT1Q9BQL6 677 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 FSD1LQ9BXM9 530 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 SEMA4CQ9C0C4 833 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 AMFRQ9UKV5 643 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 KCTD3Q9Y597 815 aa17.57■□□□□ 0.4
CPNE1-210ENST00000416778 A0A0U1RQJ8 604 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 C5orf60A6NFR6 353 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 PDZK1P1A8MUH7 402 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 GPR39O43194 453 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 C9P02748 559 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 PSMB4P28070 264 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 CETN2P41208 172 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 MAPK9P45984 424 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 DRG2P55039 364 aaKnown RBP17.56■□□□□ 0.4
CPNE1-210ENST00000416778 GTF2H3Q13889 308 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 SEPT7Q16181 437 aaKnown RBP17.56■□□□□ 0.4
CPNE1-210ENST00000416778 LINC00303Q3SY05 128 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 GPRC6AQ5T6X5 926 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 ANKS6Q68DC2 871 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 AMZ2Q86W34 360 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 FAM129CQ86XR2 697 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 TRAPPC5Q8IUR0 188 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 KLHDC8BQ8IXV7 354 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 DDHD1Q8NEL9 900 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 CCDC110Q8TBZ0 833 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 APOL2Q9BQE5 337 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 ARNT2Q9HBZ2 717 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 TRIM10Q9UDY6 481 aa17.56■□□□□ 0.4
CPNE1-210ENST00000416778 ZNF462Q96JM2 2506 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 OR52A4PA6NMU1 304 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 C2orf81A6NN90 581 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 UBXN7O94888 489 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 TYRP1P17643 537 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 VCLP18206 1134 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 RAB15P59190 212 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 XIAPP98170 497 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 DMPKQ09013 629 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 ITGA9Q13797 1035 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 PRPSAP1Q14558 356 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 PEX26Q7Z412 305 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 KIAA1328Q86T90 577 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 EXD3Q8N9H8 876 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 OR4K2Q8NGD2 314 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 RTP4Q96DX8 246 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 C9orf72Q96LT7 481 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 SPATA13Q96N96 652 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 SMOXQ9NWM0 555 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 KLHL3Q9UH77 587 aa17.55■□□□□ 0.4
CPNE1-210ENST00000416778 PILRAQ9UKJ1 303 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms