RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 C11orf96Q7Z7L8 435 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 TRAPPC5Q8IUR0 188 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 RBM12BQ8IXT5 1001 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 CACNA2D3Q8IZS8 1091 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 RTP4Q96DX8 246 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 GBA3Q9H227 469 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 KLHL3Q9UH77 587 aa17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 DNMT3AQ9Y6K1 912 aaPredicted RBP17.3■□□□□ 0.36
PDLIM2-208ENST00000416159 MN1Q10571 1320 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 GLYATL1P3A0A0U1RQE8 302 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 CCDC66A2RUB6 948 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 SOWAHDA6NJG2 315 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 BTNL10A8MVZ5 291 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 STX7O15400 261 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A9O60656 530 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UBXN7O94888 489 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 C9P02748 559 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 ANKRD34CP0C6C1 535 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 BRAFP15056 766 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A6P19224 532 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A1P22309 533 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A4P22310 534 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 FECHP22830 423 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 CTNNA2P26232 953 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 RPL10P27635 214 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 PTPN7P35236 360 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 SEPT7Q16181 437 aaKnown RBP17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 FAM151BQ6UXP7 276 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 CDKL3Q8IVW4 592 aaPredicted RBP17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 EXD3Q8N9H8 876 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 ACTL9Q8TC94 416 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 EXTL1Q92935 676 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 CXorf40BQ96DE9 158 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 C9orf72Q96LT7 481 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 OSBPL8Q9BZF1 889 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A7Q9HAW7 530 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A10Q9HAW8 530 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 UGT1A8Q9HAW9 530 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 SLC30A1Q9Y6M5 507 aa17.29■□□□□ 0.36
PDLIM2-208ENST00000416159 RCCD1A6NED2 376 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 TOX3O15405 576 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 CAPN5O15484 640 aaPredicted RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 BUD23O43709 281 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 STK10O94804 968 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 AGTP01019 485 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 SFTPCP11686 197 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 MAP4P27816 1152 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 HALP42357 657 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 RWDD2BP57060 319 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 OTUD4Q01804 1114 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 PRPSAP1Q14558 356 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 TMEM220Q6QAJ8 160 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 AMZ2Q86W34 360 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 DDHD1Q8NEL9 900 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 CTRCQ99895 268 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 FICDQ9BVA6 458 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 SLC12A9Q9BXP2 914 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 SPRY4Q9C004 299 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 C10orf88Q9H8K7 445 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 SMOXQ9NWM0 555 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 OGFRQ9NZT2 677 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 PILRAQ9UKJ1 303 aa17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 AAR2Q9Y312 384 aaKnown RBP17.28■□□□□ 0.36
PDLIM2-208ENST00000416159 C2orf81A6NN90 581 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 POLR1CO15160 346 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 PJA2O43164 708 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 POP7O75817 140 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 ZNF189O75820 626 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 RBP3P10745 1247 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 TYRP1P17643 537 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 LPOP22079 712 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 DRG2P55039 364 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 GFERP55789 205 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 DMPKQ09013 629 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 TAF1AQ15573 450 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 TBR1Q16650 682 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 GPRC6AQ5T6X5 926 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 DARS2Q6PI48 645 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 RANBP10Q6VN20 620 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 NLGN4XQ8N0W4 816 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 RASGEF1AQ8N9B8 481 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 NLGN4YQ8NFZ3 816 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 ZNF398Q8TD17 642 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 ZNF514Q96K75 400 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 EFHD1Q9BUP0 239 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 TRIT1Q9H3H1 467 aaKnown RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 SLC40A1Q9NP59 571 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 TRIM10Q9UDY6 481 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 TMEM184BQ9Y519 407 aaPredicted RBP17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 DUSP10Q9Y6W6 482 aa17.27■□□□□ 0.36
PDLIM2-208ENST00000416159 MACROD2A1Z1Q3 448 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 C5orf60A6NFR6 353 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 OR52A4PA6NMU1 304 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 GAPDHSO14556 408 aaPredicted RBP17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 TJP3O95049 919 aa17.26■□□□□ 0.35
PDLIM2-208ENST00000416159 LIFP15018 202 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms