RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 SRSF6Q13247 344 aaKnown RBP19.81■□□□□ 0.76
CTTN-205ENST00000415461 ITGA9Q13797 1035 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 TAF1AQ15573 450 aaPredicted RBP19.81■□□□□ 0.76
CTTN-205ENST00000415461 LDLRAP1Q5SW96 308 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 WDR74Q6RFH5 385 aaPredicted RBP19.81■□□□□ 0.76
CTTN-205ENST00000415461 ARHGEF18Q6ZSZ5 1173 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 TRIM48Q8IWZ4 208 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 AVL9Q8NBF6 648 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 AGBL5Q8NDL9 886 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 BRSK1Q8TDC3 778 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 NCSTNQ92542 709 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 TTC25Q96NG3 672 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 ZCCHC2Q9C0B9 1178 aaKnown RBP19.81■□□□□ 0.76
CTTN-205ENST00000415461 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.81■□□□□ 0.76
CTTN-205ENST00000415461 ZNF624Q9P2J8 865 aaPredicted RBP19.81■□□□□ 0.76
CTTN-205ENST00000415461 PDP2Q9P2J9 529 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 FKBPLQ9UIM3 349 aa19.81■□□□□ 0.76
CTTN-205ENST00000415461 C5orf60A6NFR6 353 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 LILRA5A6NI73 299 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 C2orf81A6NN90 581 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 A8MU76 341 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 ATXN7O15265 892 aaPredicted RBP19.8■□□□□ 0.76
CTTN-205ENST00000415461 CSTF2P33240 577 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTTN-205ENST00000415461 SLC19A1P41440 591 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 MSLNQ13421 630 aaPredicted RBP19.8■□□□□ 0.76
CTTN-205ENST00000415461 DENND5AQ6IQ26 1287 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 FAM129CQ86XR2 697 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 TTC13Q8NBP0 860 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 CCNL2Q96S94 520 aaPredicted RBP19.8■□□□□ 0.76
CTTN-205ENST00000415461 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.8■□□□□ 0.76
CTTN-205ENST00000415461 KLHL3Q9UH77 587 aa19.8■□□□□ 0.76
CTTN-205ENST00000415461 KALRNO60229 2985 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 ATMQ13315 3056 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 OR2AG2A6NM03 316 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 OR52A4PA6NMU1 304 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 EFCAB7A8K855 629 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 K7ENP7 123 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 ZNF189O75820 626 aaPredicted RBP19.79■□□□□ 0.76
CTTN-205ENST00000415461 METTL18O95568 372 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 VIPP01282 170 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 VCLP18206 1134 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 XRCC1P18887 633 aaPredicted RBP19.79■□□□□ 0.76
CTTN-205ENST00000415461 IDSP22304 550 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 AKT1P31749 480 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 ARSDP51689 593 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 ZNF140P52738 457 aaPredicted RBP19.79■□□□□ 0.76
CTTN-205ENST00000415461 INO80CQ6PI98 192 aaPredicted RBP19.79■□□□□ 0.76
CTTN-205ENST00000415461 CCDC81Q6ZN84 652 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 TMEM26Q6ZUK4 368 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 KLHDC8BQ8IXV7 354 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 RNF10Q8N5U6 811 aaKnown RBP19.79■□□□□ 0.76
CTTN-205ENST00000415461 OR13C4Q8NGS5 318 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 SLC35B2Q8TB61 432 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 ZNF398Q8TD17 642 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 NAT14Q8WUY8 206 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 SNRNP27Q8WVK2 155 aaKnown RBP19.79■□□□□ 0.76
CTTN-205ENST00000415461 ART4Q93070 314 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 PPP1R2P1Q96PQ5 205 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 TMEM121Q9BTD3 319 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 UCK1Q9HA47 277 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 OCIAD1Q9NX40 245 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 GUCA1BQ9UMX6 200 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 WDR37Q9Y2I8 494 aa19.79■□□□□ 0.76
CTTN-205ENST00000415461 EIF4E1BA6NMX2 242 aaKnown RBP19.78■□□□□ 0.76
CTTN-205ENST00000415461 CCL22O00626 93 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 SRP72O76094 671 aaKnown RBP19.78■□□□□ 0.76
CTTN-205ENST00000415461 PBLDP30039 288 aaPredicted RBP19.78■□□□□ 0.76
CTTN-205ENST00000415461 GSDMDP57764 484 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 TMPRSS15P98073 1019 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 CLCA4Q14CN2 919 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 TMEM164Q5U3C3 297 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 AGAP9Q5VTM2 703 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 TMEM220Q6QAJ8 160 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 PCSK4Q6UW60 755 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 ABRAXAS1Q6UWZ7 409 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 FAM83HQ6ZRV2 1179 aaPredicted RBP19.78■□□□□ 0.76
CTTN-205ENST00000415461 DET1Q7L5Y6 550 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 VASH2Q86V25 355 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 AMZ2Q86W34 360 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 TAB3Q8N5C8 712 aaPredicted RBP19.78■□□□□ 0.76
CTTN-205ENST00000415461 BEND7Q8N7W2 519 aaPredicted RBP19.78■□□□□ 0.76
CTTN-205ENST00000415461 CCDC112Q8NEF3 446 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 ATG4AQ8WYN0 398 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 TAAR9Q96RI9 348 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 TSGA10Q9BZW7 698 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 EPB41L1Q9H4G0 881 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 OGFRQ9NZT2 677 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 SLC30A1Q9Y6M5 507 aa19.78■□□□□ 0.76
CTTN-205ENST00000415461 B4E171 279 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 EFSO43281 561 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 POP7O75817 140 aaKnown RBP19.77■□□□□ 0.76
CTTN-205ENST00000415461 CRTAMO95727 393 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 PRB1P04280 392 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 TYRP1P17643 537 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 MSH3P20585 1137 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 CD82P27701 267 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 TSPAN7P41732 249 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 GFERP55789 205 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 XIAPP98170 497 aa19.77■□□□□ 0.76
CTTN-205ENST00000415461 DMPKQ09013 629 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms