RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TRIM10Q9UDY6 481 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 IL36AQ9UHA7 158 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PILRBQ9UKJ0 227 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 ITM2BQ9Y287 266 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 CA5BQ9Y2D0 317 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 EPN1Q9Y6I3 576 aaPredicted RBP4.92□□□□□ -1.62
VPS41-205ENST00000414632 DUSP10Q9Y6W6 482 aa4.92□□□□□ -1.62
VPS41-205ENST00000414632 PTPRZ1P23471 2315 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 A0A1B0GVT2 93 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 MACROD2A1Z1Q3 448 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 CAPN8A6NHC0 703 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 LRRC72A6NJI9 287 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 C4orf47A7E2U8 309 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 EIF3CLB5ME19 914 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 MUSKO15146 869 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ALOX15BO15296 676 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PLRG1O43660 514 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 PRAMEF11O60813 436 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 TCEA3O75764 348 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PALMO75781 387 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 MTA2O94776 668 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 LCA5LO95447 670 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 IGSF6O95976 241 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 GSRP00390 522 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 IGLV3-19P01714 112 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KRT7P08729 469 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PRLRP16471 622 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ENGP17813 658 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KDELR1P24390 212 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 MAN1A1P33908 653 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 HTR7P34969 479 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 CSNK1EP49674 416 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 AGFG1P52594 562 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 NDST2P52849 883 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 GEMIN4P57678 1058 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 YBEYP58557 167 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 TAS2R38P59533 333 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 MAXP61244 160 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 SNRPD1P62314 119 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 IL9RQ01113 521 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 BNC1Q01954 994 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 GBE1Q04446 702 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ZBTB16Q05516 673 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 SLC10A7Q0GE19 358 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PLCL1Q15111 1095 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 CR1LQ2VPA4 569 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 MYLK3Q32MK0 819 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 INO80DQ53TQ3 878 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 WDR45BQ5MNZ6 344 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PRAMEF14Q5SWL7 426 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PIP5KL1Q5T9C9 394 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 STPG1Q5TH74 334 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 FAM46CQ5VWP2 391 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 AFMIDQ63HM1 303 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KAZNQ674X7 775 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 SEL1L3Q68CR1 1132 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KIAA0895LQ68EN5 471 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 NCBP2-AS2Q69YL0 99 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KDM7AQ6ZMT4 941 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ETV3LQ6ZN32 361 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 USP30Q70CQ3 517 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ERN2Q76MJ5 926 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 DSG4Q86SJ6 1040 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 DAAM2Q86T65 1068 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KIAA1328Q86T90 577 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 RFX6Q8HWS3 928 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 TMTC1Q8IUR5 882 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PSTKQ8IV42 348 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 RHOT2Q8IXI1 618 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 CCDC170Q8IYT3 715 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 FAM26EQ8N5C1 309 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ATPAF2Q8N5M1 289 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PCDH20Q8N6Y1 951 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 PQLC3Q8N755 202 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 PAF1Q8N7H5 531 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 GLB1L3Q8NCI6 653 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 OR2AP1Q8NGE2 309 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 OR2T34Q8NGX1 318 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ABHD4Q8TB40 342 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 VOPP1Q96AW1 172 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 HAUS1Q96CS2 278 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 ZNF419Q96HQ0 510 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 CCDC138Q96M89 665 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 NSMCE3Q96MG7 304 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 GDAP1L1Q96MZ0 367 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 EIF3CQ99613 913 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 NCAPGQ9BPX3 1015 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 HEPHQ9BQS7 1158 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 CINPQ9BW66 212 aaPredicted RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 BTBD2Q9BX70 525 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 NUSAP1Q9BXS6 441 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 SGK2Q9HBY8 427 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 TM9SF3Q9HD45 589 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 DYRK4Q9NR20 520 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 KCMF1Q9P0J7 381 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 IPO11Q9UI26 975 aaKnown RBP4.91□□□□□ -1.62
VPS41-205ENST00000414632 SCOCQ9UIL1 159 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 FZD4Q9ULV1 537 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 SCML1Q9UN30 329 aa4.91□□□□□ -1.62
VPS41-205ENST00000414632 POLHQ9Y253 713 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms