RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 RPL22P35268 128 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 LMAN1P49257 510 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 ERVPABLB-1P60509 514 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 CFHR1Q03591 330 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 CCDC173Q0VFZ6 552 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 COL28A1Q2UY09 1125 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 FNBP1LQ5T0N5 605 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 DRICH1Q6PGQ1 229 aaPredicted RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 IGF2-ASQ6U949 168 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 AMZ2Q86W34 360 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 BEND7Q8N7W2 519 aaPredicted RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 MAIP1Q8WWC4 291 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 SGF29Q96ES7 293 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 AHCYL2Q96HN2 611 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 NAF1Q96HR8 494 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 C19orf43Q9BQ61 176 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 STN1Q9H668 368 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 RAB6BQ9NRW1 208 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 THSD1Q9NS62 852 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 NLE1Q9NVX2 485 aaPredicted RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 ZNF624Q9P2J8 865 aaPredicted RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 CRLS1Q9UJA2 301 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 DRG1Q9Y295 367 aaKnown RBP14.57□□□□□ -0.08
LIMS4-201ENST00000413601 ZKSCAN5Q9Y2L8 839 aa14.57□□□□□ -0.08
LIMS4-201ENST00000413601 IGHV5-10-1A0A0J9YXX1 117 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 AGAP14A8MT82 685 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CDRT15L2A8MXV6 281 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 RRP8O43159 456 aaKnown RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SUN1O94901 812 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 BRAFP15056 766 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 XRCC1P18887 633 aaPredicted RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 ITGALP20701 1170 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 MPSTP25325 297 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 PBLDP30039 288 aaPredicted RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 MC4RP32245 332 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SLC19A1P41440 591 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 GRIA1P42261 906 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 KCNJ1P48048 391 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CDKN1CP49918 316 aaPredicted RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 PCBP4P57723 403 aaKnown RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 GPLD1P80108 840 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CDH17Q12864 832 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 EIF3IQ13347 325 aaKnown RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SQSTM1Q13501 440 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SEMA5AQ13591 1074 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 C16orf72Q14CZ0 275 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CLPPQ16740 277 aaPredicted RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CCDC38Q502W7 563 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 ABRAXAS1Q6UWZ7 409 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 PPP1R21Q6ZMI0 780 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 LRRC69Q6ZNQ3 347 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 FAM83HQ6ZRV2 1179 aaPredicted RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 GSTA5Q7RTV2 222 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SNX20Q7Z614 316 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 NXPE1Q8N323 547 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 DNAAF3Q8N9W5 541 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 RCBTB1Q8NDN9 531 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 OR10G6Q8NH81 332 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SH3KBP1Q96B97 665 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CCDC97Q96F63 343 aaPredicted RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 CCDC74BQ96LY2 380 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 TBC1D10AQ9BXI6 508 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 ZMYND15Q9H091 742 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 TMEM9Q9P0T7 183 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 PAK5Q9P286 719 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 PISDQ9UG56 409 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 RALYQ9UKM9 306 aaKnown RBP14.56□□□□□ -0.08
LIMS4-201ENST00000413601 WDR37Q9Y2I8 494 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 JRKLQ9Y4A0 524 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 LOXL2Q9Y4K0 774 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 SLC30A1Q9Y6M5 507 aa14.56□□□□□ -0.08
LIMS4-201ENST00000413601 PKD1L2Q7Z442 2459 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 CELSR3Q9NYQ7 3312 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 PRAMEF33A0A0G2JMD5 474 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 MROH6A6NGR9 719 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 OR52A4PA6NMU1 304 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ZSCAN12O43309 604 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 KCNJ13O60928 360 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 VIPP01282 170 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 APRTP07741 180 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ITGA2BP08514 1039 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 JMJD7P0C870 316 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 PRSS56P0CW18 603 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ITIH1P19827 911 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 MAPK9P45984 424 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 LIMK2P53671 638 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 UBE2IP63279 158 aaKnown RBP14.55□□□□□ -0.08
LIMS4-201ENST00000413601 DMPKQ09013 629 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 NFE2L1Q14494 772 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 CLCA4Q14CN2 919 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 KCTD19Q17RG1 926 aaPredicted RBP14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ZRANB3Q5FWF4 1079 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 AGAP9Q5VTM2 703 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 WASH2PQ6VEQ5 465 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 TRIM48Q8IWZ4 208 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 AVL9Q8NBF6 648 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 OR4D9Q8NGE8 314 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 STYXQ8WUJ0 223 aa14.55□□□□□ -0.08
LIMS4-201ENST00000413601 ULK4Q96C45 1275 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms