RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TRBC1P01850 177 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 ARSAP15289 507 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 IL4RP24394 825 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 RPA3P35244 121 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 MPP1Q00013 466 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SIX1Q15475 284 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 NCEH1Q6PIU2 408 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CNSTQ6PJW8 725 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CMC1Q7Z7K0 106 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 AVL9Q8NBF6 648 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 DENND6BQ8NEG7 585 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SP7Q8TDD2 431 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SLC26A7Q8TE54 656 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 RFT1Q96AA3 541 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 OXNAD1Q96HP4 312 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 NARS2Q96I59 477 aaKnown RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 ENO4A6NNW6 628 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 C5orf67F2Z3F1 127 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CCL22O00626 93 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 GNGT2O14610 69 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CCNDBP1O95273 360 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 IGHA2P01877 340 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 PCNAP12004 261 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 ACADSP16219 412 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SERPINB5P36952 375 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 CSNK1DP48730 415 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 NR6A1Q15406 480 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 TBRG1Q3YBR2 411 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 LIPMQ5VYY2 423 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 ANO7Q6IWH7 933 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 LILRA6Q6PI73 481 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 MCCC1Q96RQ3 725 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-211ENST00000413186 YIPF2Q9BWQ6 316 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SLC2A4RGQ9NR83 387 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 GGT7Q9UJ14 662 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 SNX6Q9UNH7 406 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 MAPRE3Q9UPY8 281 aa8.44□□□□□ -1.06
SYNE1-211ENST00000413186 OTCP00480 354 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 VHLP40337 213 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 AQP5P55064 265 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 RPS21P63220 83 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 SMAD4Q13485 552 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 HNRNPA1L2Q32P51 320 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 WDR45BQ5MNZ6 344 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 FSTL4Q6MZW2 842 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 UBE2Q1Q7Z7E8 422 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 AMZ2Q86W34 360 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ARHGAP12Q8IWW6 846 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 OR2T3Q8NH03 318 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 MRGPRX2Q96LB1 330 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 FERD3LQ96RJ6 166 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 PKMYT1Q99640 499 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 THTPAQ9BU02 230 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 SHCBP1LQ9BZQ2 653 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 UBE2ZQ9H832 354 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 NLE1Q9NVX2 485 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 HEBP2Q9Y5Z4 205 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TTC24A2A3L6 582 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 MGAT4DA6NG13 374 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TSC22D2O75157 780 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 VIPP01282 170 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 C8GP07360 202 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ALOX15P16050 662 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ITGB8P26012 769 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 SLC1A2P43004 574 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 HSPA13P48723 471 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 OVGP1Q12889 678 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 FOXD4Q12950 439 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ACAP2Q15057 778 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CHRNA6Q15825 494 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TRMT10BQ6PF06 316 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 RGS9BPQ6ZS82 235 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 MTDHQ86UE4 582 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 HEATR4Q86WZ0 1026 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ELSPBP1Q96BH3 223 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 SLC22A12Q96S37 553 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 NME7Q9Y5B8 376 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 FAM159BA6NKW6 160 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 OR2AG2A6NM03 316 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TTC34A8MYJ7 566 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 RGS14O43566 566 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ECI2O75521 394 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CCNFP41002 786 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ARHGDIAP52565 204 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 MRPS21P82921 87 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TDGQ13569 410 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 PON2Q15165 354 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 SPDYE7PQ495Y7 208 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 LRRC73Q5JTD7 316 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TANGO2Q6ICL3 276 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 CAPN13Q6MZZ7 669 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 RAD51AP1Q96B01 352 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 ASB16Q96NS5 453 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 MNTQ99583 582 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 PHF7Q9BWX1 381 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 TEX12Q9BXU0 123 aa8.43□□□□□ -1.06
SYNE1-211ENST00000413186 IMP3Q9NV31 184 aaKnown RBP8.43□□□□□ -1.06
SYNE1-211ENST00000413186 INTS7Q9NVH2 962 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms