RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 CPNE7Q9UBL6 633 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 CRLS1Q9UJA2 301 aa18.54■□□□□ 0.56
TRIM56-202ENST00000412507 NBEAQ8NFP9 2946 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 CCDC78A2IDD5 438 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 AGAP14A8MT82 685 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PDZK1P1A8MUH7 402 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 POP7O75817 140 aaKnown RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 DXOO77932 396 aaKnown RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 SUN1O94901 812 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 VCLP18206 1134 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 ITGALP20701 1170 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 IDSP22304 550 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 RBMS1P29558 406 aaKnown RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 GRIA1P42261 906 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PPM1FP49593 454 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 DRG2P55039 364 aaKnown RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 KCTD19Q17RG1 926 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 CCDC38Q502W7 563 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PHF19Q5T6S3 580 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PPP1R21Q6ZMI0 780 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 ZNF574Q6ZN55 896 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 GSTA5Q7RTV2 222 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 SNX20Q7Z614 316 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 FBXO39Q8N4B4 442 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 BEND7Q8N7W2 519 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PRELID2Q8N945 189 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 STYXQ8WUJ0 223 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 SGF29Q96ES7 293 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 CCDC97Q96F63 343 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PDLIM2Q96JY6 352 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 ZNF578Q96N58 590 aaPredicted RBP18.53■□□□□ 0.56
TRIM56-202ENST00000412507 SLC46A1Q96NT5 459 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PCDHGA8Q9Y5G5 932 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 SLC30A1Q9Y6M5 507 aa18.53■□□□□ 0.56
TRIM56-202ENST00000412507 PRSS56P0CW18 603 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 HGFP14210 728 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 BRAFP15056 766 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 PBLDP30039 288 aaPredicted RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 CSF2RBP32927 897 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 EIF2S3P41091 472 aaKnown RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 SLC19A1P41440 591 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 CDKN1CP49918 316 aaPredicted RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 UBE2IP63279 158 aaKnown RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 CFHR1Q03591 330 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 ZRANB3Q5FWF4 1079 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 FNBP1LQ5T0N5 605 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 C19orf48Q6RUI8 117 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 IGF2-ASQ6U949 168 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 AMZ2Q86W34 360 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 NXPE1Q8N323 547 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 SNIP1Q8TAD8 396 aaKnown RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 HNRNPLLQ8WVV9 542 aaKnown RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 SH3KBP1Q96B97 665 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 ULK4Q96C45 1275 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 AHCYL2Q96HN2 611 aaKnown RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 CDKN2AIPNLQ96HQ2 116 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 MS4A14Q96JA4 679 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 PBKQ96KB5 322 aa18.52■□□□□ 0.56
TRIM56-202ENST00000412507 ZNF624Q9P2J8 865 aaPredicted RBP18.52■□□□□ 0.56
TRIM56-202ENST00000412507 PTPRQQ9UMZ3 2332 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 MROH6A6NGR9 719 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 H7C0S8 307 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 PLD2O14939 933 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 KCNJ13O60928 360 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 TNFSF15O95150 251 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 APRTP07741 180 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 HOXB3P14651 431 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 XRCC1P18887 633 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 GPLD1P80108 840 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 EIF3IQ13347 325 aaKnown RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 CLPPQ16740 277 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 ABRAXAS1Q6UWZ7 409 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 FAM83HQ6ZRV2 1179 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 TRIM48Q8IWZ4 208 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 RASGEF1CQ8N431 466 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 RCBTB1Q8NDN9 531 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 ZNF514Q96K75 400 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 TBC1D10AQ9BXI6 508 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 ZMYND15Q9H091 742 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 CASS4Q9NQ75 786 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 THSD1Q9NS62 852 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 HOMER3Q9NSC5 361 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 TMEM9Q9P0T7 183 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 LOXL2Q9Y4K0 774 aa18.51■□□□□ 0.55
TRIM56-202ENST00000412507 DNMT3AQ9Y6K1 912 aaPredicted RBP18.51■□□□□ 0.55
TRIM56-202ENST00000412507 CFAP47Q6ZTR5 3102 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 SDK2Q58EX2 2172 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 A0A087WV48 116 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 IGHV5-10-1A0A0J9YXX1 117 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 OR52A4PA6NMU1 304 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 GAS8O95995 478 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 VIPP01282 170 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 MPSTP25325 297 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 MAPK9P45984 424 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 ARSDP51689 593 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 LIMK2P53671 638 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 ERVPABLB-1P60509 514 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 BASP1P80723 227 aaKnown RBP18.5■□□□□ 0.55
TRIM56-202ENST00000412507 DMPKQ09013 629 aa18.5■□□□□ 0.55
TRIM56-202ENST00000412507 CCDC173Q0VFZ6 552 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms